| Chain sequence(s) |
A: MIPGGLSEAKPATPEIQEIVDKVKPQLEEKTNETYGKLEAVQYKTQVVAGTNYYIKVRAGDNKYLHLKVFKSLPGQNEDLVLTGYQVDKNKDDELTGF
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:06)
[INFO] Main: Simulation completed successfully. (00:02:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.3891 | |
| 2 | I | A | 1.2566 | |
| 3 | P | A | 1.0113 | |
| 4 | G | A | 0.0000 | |
| 5 | G | A | 0.1101 | |
| 6 | L | A | 0.5137 | |
| 7 | S | A | -0.3737 | |
| 8 | E | A | -1.2084 | |
| 9 | A | A | -0.9518 | |
| 10 | K | A | -1.6503 | |
| 11 | P | A | -0.7920 | |
| 12 | A | A | 0.0000 | |
| 13 | T | A | 0.0000 | |
| 14 | P | A | -1.6901 | |
| 15 | E | A | -2.6857 | |
| 16 | I | A | 0.0000 | |
| 17 | Q | A | -2.5654 | |
| 18 | E | A | -3.2506 | |
| 19 | I | A | -1.7867 | |
| 20 | V | A | 0.0000 | |
| 21 | D | A | -3.5371 | |
| 22 | K | A | -2.2408 | |
| 23 | V | A | 0.2816 | |
| 24 | K | A | 0.0000 | |
| 25 | P | A | -2.3138 | |
| 26 | Q | A | -2.5171 | |
| 27 | L | A | -2.0934 | |
| 28 | E | A | -3.1228 | |
| 29 | E | A | -3.8868 | |
| 30 | K | A | -3.5248 | |
| 31 | T | A | -2.9699 | |
| 32 | N | A | -2.9253 | |
| 33 | E | A | -1.9617 | |
| 34 | T | A | -0.2879 | |
| 35 | Y | A | 0.3782 | |
| 36 | G | A | -0.5340 | |
| 37 | K | A | -1.4923 | |
| 38 | L | A | -2.0618 | |
| 39 | E | A | -1.8231 | |
| 40 | A | A | 0.0000 | |
| 41 | V | A | 0.0000 | |
| 42 | Q | A | 0.0000 | |
| 43 | Y | A | -0.6549 | |
| 44 | K | A | -0.7725 | |
| 45 | T | A | -0.1739 | |
| 46 | Q | A | 0.2872 | |
| 47 | V | A | 2.0922 | |
| 48 | V | A | 2.3681 | |
| 49 | A | A | 0.8111 | |
| 50 | G | A | 0.2752 | |
| 51 | T | A | 1.0846 | |
| 52 | N | A | 1.1766 | |
| 53 | Y | A | 0.8810 | |
| 54 | Y | A | 0.6003 | |
| 55 | I | A | 0.0000 | |
| 56 | K | A | 0.0000 | |
| 57 | V | A | 0.0000 | |
| 58 | R | A | -1.0608 | |
| 59 | A | A | 0.0000 | |
| 60 | G | A | 0.0000 | |
| 61 | D | A | -2.8730 | |
| 62 | N | A | -3.3978 | |
| 63 | K | A | -3.2553 | |
| 64 | Y | A | -2.2128 | |
| 65 | L | A | 0.0000 | |
| 66 | H | A | 0.0000 | |
| 67 | L | A | 0.0000 | |
| 68 | K | A | 0.0000 | |
| 69 | V | A | 1.1320 | |
| 70 | F | A | 0.0000 | |
| 71 | K | A | -0.1916 | |
| 72 | S | A | -0.3079 | |
| 73 | L | A | -0.9665 | |
| 74 | P | A | -0.8355 | |
| 75 | G | A | -1.5965 | |
| 76 | Q | A | -2.5910 | |
| 77 | N | A | -3.0161 | |
| 78 | E | A | -3.2608 | |
| 79 | D | A | -2.4978 | |
| 80 | L | A | -0.1934 | |
| 81 | V | A | 1.1587 | |
| 82 | L | A | 1.8635 | |
| 83 | T | A | 1.1179 | |
| 84 | G | A | 1.1740 | |
| 85 | Y | A | 1.6373 | |
| 86 | Q | A | 0.4668 | |
| 87 | V | A | 0.3491 | |
| 88 | D | A | 0.0000 | |
| 89 | K | A | -3.2948 | |
| 90 | N | A | -3.9923 | |
| 91 | K | A | -3.4998 | |
| 92 | D | A | -2.2069 | |
| 93 | D | A | -2.9416 | |
| 94 | E | A | -1.5469 | |
| 95 | L | A | 0.9213 | |
| 96 | T | A | 0.8951 | |
| 97 | G | A | 1.1627 | |
| 98 | F | A | 1.6192 |