| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFEDIVVNGKVLVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSVGHPLFNKLGDTENPTEYVHETEDVRVDFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRSGPEGRPLPDAPPPSPLYTRPPPSSPYWKRPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQISTPLPNVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.8939 | |
| 2 | L | A | 1.8251 | |
| 3 | P | A | 0.5416 | |
| 4 | P | A | 0.1957 | |
| 5 | T | A | -0.0277 | |
| 6 | T | A | -0.0613 | |
| 7 | P | A | 0.2695 | |
| 8 | V | A | 1.2018 | |
| 9 | A | A | -0.0311 | |
| 10 | K | A | -1.1316 | |
| 11 | V | A | -0.4031 | |
| 12 | Q | A | -1.4958 | |
| 13 | S | A | -1.5748 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3800 | |
| 16 | E | A | -2.4162 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4704 | |
| 20 | P | A | 0.1154 | |
| 21 | T | A | 0.1171 | |
| 22 | S | A | -0.1672 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.0904 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2719 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8721 | |
| 31 | R | A | -2.6413 | |
| 32 | L | A | -0.7736 | |
| 33 | L | A | 1.2255 | |
| 34 | T | A | 1.4761 | |
| 35 | V | A | 2.0234 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2229 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6607 | |
| 40 | E | A | -1.7688 | |
| 41 | D | A | -0.7882 | |
| 42 | I | A | 1.2558 | |
| 43 | V | A | 2.1781 | |
| 44 | V | A | 1.6402 | |
| 45 | N | A | -0.5370 | |
| 46 | G | A | -0.3738 | |
| 47 | K | A | -0.1314 | |
| 48 | V | A | 2.0139 | |
| 49 | L | A | 2.5405 | |
| 50 | V | A | 1.4749 | |
| 51 | P | A | 0.3558 | |
| 52 | K | A | -0.6947 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1515 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4842 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2966 | |
| 70 | K | A | -1.8115 | |
| 71 | F | A | -0.6711 | |
| 72 | A | A | -0.5835 | |
| 73 | L | A | -0.8717 | |
| 74 | P | A | -1.2667 | |
| 75 | Q | A | -2.4772 | |
| 76 | K | A | -3.0908 | |
| 77 | D | A | -2.9794 | |
| 78 | F | A | -1.6293 | |
| 79 | Y | A | -1.8967 | |
| 80 | D | A | -2.7289 | |
| 81 | P | A | -2.3460 | |
| 82 | E | A | -3.0676 | |
| 83 | K | A | -3.4301 | |
| 84 | E | A | -2.4930 | |
| 85 | R | A | -1.3094 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6208 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9577 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3088 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6782 | |
| 99 | G | A | -0.5423 | |
| 100 | P | A | -0.4325 | |
| 101 | L | A | -0.0095 | |
| 102 | G | A | -0.2670 | |
| 103 | K | A | -0.7475 | |
| 104 | G | A | -0.6048 | |
| 105 | S | A | -0.6268 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.2429 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.4242 | |
| 110 | L | A | -0.1943 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.2351 | |
| 113 | K | A | -0.6280 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | -0.8214 | |
| 116 | D | A | -1.3063 | |
| 117 | T | A | -0.9235 | |
| 118 | E | A | -1.8445 | |
| 119 | N | A | -2.2391 | |
| 120 | P | A | -1.7279 | |
| 121 | T | A | -1.3949 | |
| 122 | E | A | -1.7025 | |
| 123 | Y | A | -0.0915 | |
| 124 | V | A | -0.0723 | |
| 125 | H | A | -1.3516 | |
| 126 | E | A | -2.6387 | |
| 127 | T | A | -2.1402 | |
| 128 | E | A | -3.2055 | |
| 129 | D | A | -2.9471 | |
| 130 | V | A | -1.7604 | |
| 131 | R | A | -1.3955 | |
| 132 | V | A | -0.5644 | |
| 133 | D | A | -1.4108 | |
| 134 | F | A | -0.6308 | |
| 135 | S | A | -0.5216 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7989 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5577 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2484 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.0516 | |
| 157 | D | A | 0.1974 | |
| 158 | L | A | 0.5856 | |
| 159 | A | A | 0.0084 | |
| 160 | E | A | -1.5427 | |
| 161 | P | A | -0.3331 | |
| 162 | C | A | 0.1441 | |
| 163 | P | A | -0.1978 | |
| 164 | G | A | -0.1054 | |
| 165 | L | A | 0.5275 | |
| 166 | P | A | -0.1387 | |
| 167 | P | A | -0.3523 | |
| 168 | G | A | -0.4941 | |
| 169 | A | A | -0.1588 | |
| 170 | C | A | 0.5200 | |
| 171 | P | A | 0.4417 | |
| 172 | P | A | 0.6358 | |
| 173 | I | A | 1.7664 | |
| 174 | Q | A | 0.7163 | |
| 175 | L | A | 1.4127 | |
| 176 | V | A | 0.7890 | |
| 177 | N | A | -0.3537 | |
| 178 | S | A | 0.0012 | |
| 179 | V | A | 0.3948 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3632 | |
| 182 | D | A | 0.0542 | |
| 183 | G | A | -0.1652 | |
| 184 | D | A | -0.5703 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1627 | |
| 190 | F | A | 0.0643 | |
| 191 | G | A | -0.1061 | |
| 192 | N | A | -0.2900 | |
| 193 | M | A | -0.1839 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3520 | |
| 197 | E | A | -2.5179 | |
| 198 | L | A | -1.2265 | |
| 199 | Q | A | -2.5017 | |
| 200 | Q | A | -3.3110 | |
| 201 | D | A | -3.5885 | |
| 202 | R | A | -3.3297 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1798 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3792 | |
| 211 | S | A | -1.9208 | |
| 212 | T | A | -1.4738 | |
| 213 | R | A | -2.1626 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1855 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3316 | |
| 220 | L | A | 0.5289 | |
| 221 | K | A | -1.2569 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8732 | |
| 224 | N | A | -1.6405 | |
| 225 | E | A | -1.3075 | |
| 226 | A | A | -0.6657 | |
| 227 | Y | A | -0.4047 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6951 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0998 | |
| 234 | F | A | 0.2948 | |
| 235 | G | A | -0.8150 | |
| 236 | R | A | -2.6427 | |
| 237 | R | A | -2.9509 | |
| 238 | E | A | -2.1732 | |
| 239 | Q | A | -0.1231 | |
| 240 | V | A | 1.5725 | |
| 241 | Y | A | 1.2570 | |
| 242 | A | A | 0.1852 | |
| 243 | R | A | -1.2345 | |
| 244 | H | A | -0.9887 | |
| 245 | F | A | 0.1083 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.8471 | |
| 249 | S | A | -1.4724 | |
| 250 | G | A | -1.3260 | |
| 251 | P | A | -1.3235 | |
| 252 | E | A | -1.6884 | |
| 253 | G | A | -1.6860 | |
| 254 | R | A | -2.3099 | |
| 255 | P | A | -1.7947 | |
| 256 | L | A | -0.6205 | |
| 257 | P | A | -1.0759 | |
| 258 | D | A | -1.9166 | |
| 259 | A | A | -1.0991 | |
| 260 | P | A | -1.1539 | |
| 261 | P | A | -0.8479 | |
| 262 | P | A | -0.4582 | |
| 263 | S | A | -0.3500 | |
| 264 | P | A | 0.4080 | |
| 265 | L | A | 1.2169 | |
| 266 | Y | A | 0.4153 | |
| 267 | T | A | -0.4382 | |
| 268 | R | A | -1.5009 | |
| 269 | P | A | -0.7484 | |
| 270 | P | A | -0.5285 | |
| 271 | P | A | -0.6516 | |
| 272 | S | A | -0.4119 | |
| 273 | S | A | -0.2790 | |
| 274 | P | A | -0.1262 | |
| 275 | Y | A | 0.3213 | |
| 276 | W | A | -0.5607 | |
| 277 | K | A | -1.8840 | |
| 278 | R | A | -1.2038 | |
| 279 | P | A | -0.8912 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.5306 | |
| 282 | D | A | -0.9469 | |
| 283 | Y | A | 0.8618 | |
| 284 | F | A | 0.7468 | |
| 285 | G | A | 0.2574 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9494 | |
| 291 | L | A | 1.6520 | |
| 292 | V | A | 0.6562 | |
| 293 | S | A | -0.1530 | |
| 294 | S | A | -0.9693 | |
| 295 | D | A | -1.8393 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1269 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6253 | |
| 301 | R | A | -1.8709 | |
| 302 | P | A | -0.9789 | |
| 303 | F | A | -0.1527 | |
| 304 | W | A | -0.5078 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0747 | |
| 307 | R | A | -2.8228 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.3730 | |
| 310 | G | A | -1.2260 | |
| 311 | N | A | -1.3009 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9699 | |
| 319 | N | A | -0.9009 | |
| 320 | E | A | -1.0565 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3676 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.2067 | |
| 333 | N | A | 0.3920 | |
| 334 | F | A | 1.4796 | |
| 335 | T | A | 0.7852 | |
| 336 | I | A | 0.3716 | |
| 337 | S | A | -0.9518 | |
| 338 | Q | A | -1.6220 | |
| 339 | Q | A | -0.8222 | |
| 340 | I | A | 0.8831 | |
| 341 | S | A | 0.5990 | |
| 342 | T | A | 0.3224 | |
| 343 | P | A | 0.1617 | |
| 344 | L | A | 1.0467 | |
| 345 | P | A | 0.3159 | |
| 346 | N | A | -0.0343 | |
| 347 | V | A | 1.6399 | |
| 348 | Y | A | 1.4730 | |
| 349 | D | A | -0.0691 | |
| 350 | P | A | -0.7373 | |
| 351 | S | A | -0.5449 | |
| 352 | N | A | -0.0984 | |
| 353 | F | A | -0.8591 | |
| 354 | K | A | -2.0794 | |
| 355 | N | A | -1.8124 | |
| 356 | Y | A | -0.0226 | |
| 357 | L | A | 0.6587 | |
| 358 | R | A | 0.9469 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4759 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | 0.0066 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9201 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6617 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3082 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3279 | |
| 376 | L | A | -1.7765 | |
| 377 | D | A | -2.0413 | |
| 378 | P | A | -0.8834 | |
| 379 | G | A | -0.8440 | |
| 380 | V | A | -0.9001 | |
| 381 | L | A | -0.2465 | |
| 382 | A | A | 0.0321 | |
| 383 | H | A | -0.5663 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -0.3646 | |
| 386 | T | A | -0.0015 | |
| 387 | M | A | -0.1293 | |
| 388 | N | A | -0.6506 | |
| 389 | P | A | -1.0273 | |
| 390 | T | A | -1.5390 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5031 | |
| 393 | E | A | -3.0236 | |
| 394 | N | A | -2.9483 | |
| 395 | W | A | -1.6815 | |
| 396 | N | A | -1.3783 | |
| 397 | L | A | -0.3359 | |
| 398 | G | A | 0.4590 | |
| 399 | F | A | 2.3991 | |
| 400 | V | A | 1.8203 | |
| 401 | P | A | 0.0438 | |
| 402 | P | A | -2.0581 | |
| 403 | K | A | -3.5954 | |
| 404 | E | A | -4.1610 | |
| 405 | R | A | -4.7678 | |
| 406 | E | A | -4.1719 | |
| 407 | D | A | -3.0675 | |
| 408 | P | A | -1.8743 | |
| 409 | Y | A | -0.9975 | |
| 410 | K | A | -2.1104 | |
| 411 | G | A | -0.6502 | |
| 412 | L | A | 0.6526 | |
| 413 | I | A | 1.5666 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4229 | |
| 416 | E | A | -1.7233 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9522 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0713 | |
| 421 | E | A | -2.7925 | |
| 422 | R | A | -2.5856 | |
| 423 | F | A | -1.3072 | |
| 424 | S | A | -1.4779 | |
| 425 | Q | A | -1.8117 | |
| 426 | D | A | -2.9045 | |
| 427 | L | A | -1.9916 | |
| 428 | D | A | -2.7745 | |
| 429 | Q | A | -2.6149 | |
| 430 | F | A | -1.4264 | |
| 431 | A | A | -0.8868 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5409 | |
| 435 | K | A | -0.6978 | |
| 436 | F | A | 0.1792 | |
| 437 | L | A | 1.0503 | |
| 438 | Y | A | 0.8416 | |
| 439 | Q | A | -0.2535 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine