Project name: query_structure

Status: done

Started: 2026-03-16 23:33:58
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Chain sequence(s) A: GSSVPTNLEVVAATPTSLLISWDASYSSYVSYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAYSYYYYYYSSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:30)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:30)
Show buried residues

Minimal score value
-2.5955
Maximal score value
3.6564
Average score
-0.2194
Total score value
-20.4056

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.2054
2 S A -0.1113
3 S A 0.6820
4 V A 0.2839
5 P A 0.0000
6 T A -1.2501
7 N A -2.0268
8 L A -1.3060
9 E A -1.6375
10 V A 0.2085
11 V A 1.5754
12 A A 0.9085
13 A A 0.3210
14 T A -0.1758
15 P A -1.1611
16 T A -1.0374
17 S A -0.5257
18 L A 0.0000
19 L A 0.7752
20 I A 0.0000
21 S A -0.7343
22 W A 0.0000
23 D A -1.9134
24 A A -0.7240
25 S A 0.3312
26 Y A 1.1007
27 S A 0.8005
28 S A 0.7285
29 Y A 1.9688
30 V A 1.5928
31 S A 0.8273
32 Y A 0.2584
33 Y A 0.0000
34 R A -0.4235
35 I A 0.0000
36 T A -0.6353
37 Y A -0.4401
38 G A 0.0000
39 E A -1.9351
40 T A -1.4220
41 G A -1.3822
42 G A -1.3585
43 N A -1.7286
44 S A -0.9899
45 P A -0.4139
46 V A 0.2517
47 Q A -1.2459
48 E A -1.8188
49 F A -0.6804
50 T A -0.1761
51 V A -0.2586
52 P A -0.5642
53 G A -0.4780
54 S A -0.9623
55 K A -1.7470
56 S A -1.1463
57 T A -0.5882
58 A A 0.0000
59 T A 0.0944
60 I A 0.0000
61 S A -0.6528
62 G A -1.0352
63 L A 0.0000
64 K A -2.4815
65 P A -1.8129
66 G A -1.5759
67 V A -1.6588
68 D A -2.1343
69 Y A -1.3428
70 T A -0.7518
71 I A 0.0000
72 T A -0.2915
73 V A 0.0000
74 Y A 0.3539
75 A A 0.0000
76 Y A 1.8571
77 S A 0.0000
78 Y A 3.4242
79 Y A 3.4259
80 Y A 3.6311
81 Y A 3.6564
82 Y A 3.0490
83 Y A 1.6736
84 S A 0.8219
85 S A 0.1092
86 P A -0.0683
87 I A 0.0872
88 S A -0.4241
89 I A -0.4863
90 N A -1.6588
91 Y A -1.4687
92 R A -2.5955
93 T A -1.5610
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Laboratory of Theory of Biopolymers 2018