| Chain sequence(s) |
H: QVQLVQSGAEVKKPGSSVMVSCQASGGLLEDYIINWVRQAPGQGPEWMGGIIPVLGTVHYGPKFQGRVTITADESTDTAYMELSSLRSEDTAMYYCATETALVVSETYLPHYFDNWGQGTLVTVSS
L: DIQMTQSPSSLSAAVGDRVTITCQASQDIVNYLNWYQQKPGKAPKLLIYVASNLETGVPSRFSGSGSGTDFSLTISSLQPEDVATYYCQQYDNLPLTFGGGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:10)
[INFO] Main: Simulation completed successfully. (00:01:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.7189 | |
| 2 | V | H | 0.0000 | |
| 3 | Q | H | -1.5633 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.4414 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.0848 | |
| 8 | G | H | -0.4523 | |
| 9 | A | H | 0.1813 | |
| 11 | E | H | 0.2343 | |
| 12 | V | H | 1.0428 | |
| 13 | K | H | -0.7113 | |
| 14 | K | H | -1.7020 | |
| 15 | P | H | -1.8768 | |
| 16 | G | H | -1.4719 | |
| 17 | S | H | -1.1608 | |
| 18 | S | H | -0.7177 | |
| 19 | V | H | 0.0000 | |
| 20 | M | H | 0.4773 | |
| 21 | V | H | 0.0000 | |
| 22 | S | H | 0.1890 | |
| 23 | C | H | 0.0000 | |
| 24 | Q | H | -0.3271 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.7872 | |
| 27 | G | H | -1.2046 | |
| 28 | G | H | -0.8586 | |
| 29 | L | H | -0.3900 | |
| 30 | L | H | 0.0000 | |
| 35 | E | H | -0.9111 | |
| 36 | D | H | 0.1248 | |
| 37 | Y | H | 0.2988 | |
| 38 | I | H | 0.0000 | |
| 39 | I | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.5712 | |
| 45 | A | H | -0.9466 | |
| 46 | P | H | -1.0442 | |
| 47 | G | H | -1.2070 | |
| 48 | Q | H | -1.7308 | |
| 49 | G | H | -1.0658 | |
| 50 | P | H | 0.0000 | |
| 51 | E | H | -0.7868 | |
| 52 | W | H | 0.0000 | |
| 53 | M | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | G | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | I | H | 0.0000 | |
| 58 | P | H | -0.1157 | |
| 59 | V | H | 1.2545 | |
| 62 | L | H | 0.5105 | |
| 63 | G | H | 0.2897 | |
| 64 | T | H | 0.3942 | |
| 65 | V | H | 0.8995 | |
| 66 | H | H | 0.4077 | |
| 67 | Y | H | -0.2487 | |
| 68 | G | H | 0.0000 | |
| 69 | P | H | -1.5948 | |
| 70 | K | H | -2.2385 | |
| 71 | F | H | 0.0000 | |
| 72 | Q | H | -2.0274 | |
| 74 | G | H | -1.4652 | |
| 75 | R | H | -1.3125 | |
| 76 | V | H | 0.0000 | |
| 77 | T | H | -0.2290 | |
| 78 | I | H | 0.0000 | |
| 79 | T | H | -0.1332 | |
| 80 | A | H | -0.8600 | |
| 81 | D | H | -1.4963 | |
| 82 | E | H | -2.3266 | |
| 83 | S | H | -1.2461 | |
| 84 | T | H | -0.9637 | |
| 85 | D | H | -1.2818 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | 0.2065 | |
| 89 | M | H | 0.0000 | |
| 90 | E | H | -0.0616 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -0.6806 | |
| 93 | S | H | -1.0441 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.8518 | |
| 96 | S | H | -2.2265 | |
| 97 | E | H | -2.5375 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.7318 | |
| 100 | A | H | 0.0000 | |
| 101 | M | H | 0.3629 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | T | H | 0.0000 | |
| 107 | E | H | 0.0000 | |
| 108 | T | H | 0.4017 | |
| 109 | A | H | 0.0000 | |
| 110 | L | H | 2.2617 | |
| 111 | V | H | 2.7703 | |
| 111A | V | H | 1.5995 | |
| 111B | S | H | -0.1172 | |
| 111C | E | H | -1.6099 | |
| 112C | T | H | -0.6432 | |
| 112B | Y | H | 0.1864 | |
| 112A | L | H | 0.3284 | |
| 112 | P | H | 0.0000 | |
| 113 | H | H | 0.1939 | |
| 114 | Y | H | 0.3412 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.4998 | |
| 117 | N | H | -0.9567 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.1025 | |
| 121 | G | H | -0.4259 | |
| 122 | T | H | 0.0000 | |
| 123 | L | H | 0.8903 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.0630 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.7115 | |
| 128 | S | H | -0.6157 | |
| 1 | D | L | -2.3025 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.0001 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.1363 | |
| 6 | Q | L | -0.8077 | |
| 7 | S | L | -0.7413 | |
| 8 | P | L | -0.6577 | |
| 9 | S | L | -0.8959 | |
| 10 | S | L | -1.1798 | |
| 11 | L | L | -0.8749 | |
| 12 | S | L | -1.1092 | |
| 13 | A | L | 0.0000 | |
| 14 | A | L | -0.7059 | |
| 15 | V | L | 0.2919 | |
| 16 | G | L | -0.5247 | |
| 17 | D | L | -1.6361 | |
| 18 | R | L | -2.2922 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6246 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.7683 | |
| 23 | C | L | 0.0000 | |
| 24 | Q | L | -2.2488 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.9087 | |
| 27 | Q | L | -2.1040 | |
| 28 | D | L | -2.0681 | |
| 29 | I | L | 0.0000 | |
| 36 | V | L | 0.8553 | |
| 37 | N | L | 0.3316 | |
| 38 | Y | L | 0.7147 | |
| 39 | L | L | 0.0000 | |
| 40 | N | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -0.8265 | |
| 44 | Q | L | -1.3079 | |
| 45 | K | L | -1.7654 | |
| 46 | P | L | -1.1985 | |
| 47 | G | L | -1.6590 | |
| 48 | K | L | -2.5303 | |
| 49 | A | L | -1.5751 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.3120 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.6315 | |
| 56 | V | L | 0.8932 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.3093 | |
| 66 | N | L | -0.3775 | |
| 67 | L | L | 0.0637 | |
| 68 | E | L | -0.3397 | |
| 69 | T | L | -0.3704 | |
| 70 | G | L | -0.4573 | |
| 71 | V | L | -0.2700 | |
| 72 | P | L | -0.3423 | |
| 74 | S | L | -0.4299 | |
| 75 | R | L | -0.7551 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.4133 | |
| 78 | G | L | 0.0000 | |
| 79 | S | L | -0.7505 | |
| 80 | G | L | -0.8500 | |
| 83 | S | L | -0.6718 | |
| 84 | G | L | -0.8980 | |
| 85 | T | L | -1.8241 | |
| 86 | D | L | -2.3758 | |
| 87 | F | L | 0.0000 | |
| 88 | S | L | -0.7570 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | 0.0000 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.4161 | |
| 93 | S | L | -1.1761 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.7657 | |
| 96 | P | L | -0.9338 | |
| 97 | E | L | -1.5724 | |
| 98 | D | L | 0.0000 | |
| 99 | V | L | -0.4243 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -1.0946 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | 0.0000 | |
| 108 | D | L | -0.8034 | |
| 109 | N | L | -1.1411 | |
| 114 | L | L | -0.3467 | |
| 115 | P | L | 0.0000 | |
| 116 | L | L | 0.0000 | |
| 117 | T | L | -0.7550 | |
| 118 | F | L | -0.2550 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -1.1137 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -2.0826 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -1.5788 | |
| 126 | I | L | -0.7171 | |
| 127 | K | L | -1.5032 |