| Chain sequence(s) |
A: VNYLETWDAFEKAVKNAGDKLVVIDFTAKWCGPCRMIGPKFEAMSSEFKNADFYKVDVDENPETAERNNVNCMPTFQFFKGGEKIHEFSGASEDKLRAAIQERC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:54)
[INFO] Main: Simulation completed successfully. (00:02:55)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 0.0228 | |
| 2 | N | A | -0.7938 | |
| 3 | Y | A | -0.2036 | |
| 4 | L | A | 0.0000 | |
| 5 | E | A | -2.7876 | |
| 6 | T | A | -2.0015 | |
| 7 | W | A | -2.1655 | |
| 8 | D | A | -2.6654 | |
| 9 | A | A | -1.9112 | |
| 10 | F | A | 0.0000 | |
| 11 | E | A | -2.8418 | |
| 12 | K | A | -3.4772 | |
| 13 | A | A | -2.3408 | |
| 14 | V | A | 0.0000 | |
| 15 | K | A | -3.8760 | |
| 16 | N | A | -3.3345 | |
| 17 | A | A | -2.8201 | |
| 18 | G | A | -2.6749 | |
| 19 | D | A | -3.2706 | |
| 20 | K | A | -3.2436 | |
| 21 | L | A | 0.0000 | |
| 22 | V | A | 0.0000 | |
| 23 | V | A | 0.0000 | |
| 24 | I | A | 0.0000 | |
| 25 | D | A | 0.0000 | |
| 26 | F | A | 0.0000 | |
| 27 | T | A | 0.0000 | |
| 28 | A | A | 0.0000 | |
| 29 | K | A | -2.0067 | |
| 30 | W | A | -0.2032 | |
| 31 | C | A | 0.0000 | |
| 32 | G | A | -0.7517 | |
| 33 | P | A | -0.3855 | |
| 34 | C | A | 0.0000 | |
| 35 | R | A | -1.7732 | |
| 36 | M | A | -0.2781 | |
| 37 | I | A | 0.0000 | |
| 38 | G | A | 0.0000 | |
| 39 | P | A | -1.1181 | |
| 40 | K | A | -1.6327 | |
| 41 | F | A | 0.0000 | |
| 42 | E | A | -1.8511 | |
| 43 | A | A | -1.3337 | |
| 44 | M | A | 0.0000 | |
| 45 | S | A | -1.7120 | |
| 46 | S | A | -1.7287 | |
| 47 | E | A | -2.5698 | |
| 48 | F | A | -2.2134 | |
| 49 | K | A | -2.9031 | |
| 50 | N | A | -2.7732 | |
| 51 | A | A | -2.4035 | |
| 52 | D | A | -1.7555 | |
| 53 | F | A | 0.0000 | |
| 54 | Y | A | -0.1040 | |
| 55 | K | A | 0.0000 | |
| 56 | V | A | 0.0000 | |
| 57 | D | A | -1.7430 | |
| 58 | V | A | -2.3569 | |
| 59 | D | A | -3.1892 | |
| 60 | E | A | -3.4714 | |
| 61 | N | A | 0.0000 | |
| 62 | P | A | -2.9084 | |
| 63 | E | A | -3.6927 | |
| 64 | T | A | 0.0000 | |
| 65 | A | A | 0.0000 | |
| 66 | E | A | -3.9716 | |
| 67 | R | A | -3.6143 | |
| 68 | N | A | -2.7420 | |
| 69 | N | A | -2.9176 | |
| 70 | V | A | -1.8173 | |
| 71 | N | A | -1.5478 | |
| 72 | C | A | -0.1608 | |
| 73 | M | A | 0.2174 | |
| 74 | P | A | 0.0000 | |
| 75 | T | A | 0.0000 | |
| 76 | F | A | 0.0000 | |
| 77 | Q | A | 0.0000 | |
| 78 | F | A | 0.0000 | |
| 79 | F | A | 0.0000 | |
| 80 | K | A | -2.6336 | |
| 81 | G | A | -2.8139 | |
| 82 | G | A | -3.1188 | |
| 83 | E | A | -2.6593 | |
| 84 | K | A | -1.9242 | |
| 85 | I | A | -0.3572 | |
| 86 | H | A | -0.8482 | |
| 87 | E | A | -1.1785 | |
| 88 | F | A | -0.7449 | |
| 89 | S | A | -0.5540 | |
| 90 | G | A | -0.4644 | |
| 91 | A | A | -0.9909 | |
| 92 | S | A | -1.8073 | |
| 93 | E | A | -2.7947 | |
| 94 | D | A | -3.4201 | |
| 95 | K | A | -3.2779 | |
| 96 | L | A | 0.0000 | |
| 97 | R | A | -2.8683 | |
| 98 | A | A | -2.5177 | |
| 99 | A | A | 0.0000 | |
| 100 | I | A | 0.0000 | |
| 101 | Q | A | -2.4824 | |
| 102 | E | A | -2.5292 | |
| 103 | R | A | -1.5487 | |
| 104 | C | A | -1.7352 |