Chain sequence(s) |
A: QVQLVESGGGLVQPGGSLRLSCAASGSMDFPFSSYSLGWFRQAPGQGLEAVAAISSDGKYTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAARESEAFNPLDPSRYDYWGQGTLVTVS
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:29) [INFO] Main: Simulation completed successfully. (00:01:30) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | A | -1.4387 | |
2 | V | A | -1.1473 | |
3 | Q | A | -1.2624 | |
4 | L | A | 0.0000 | |
5 | V | A | 1.1450 | |
6 | E | A | 0.0000 | |
7 | S | A | -0.1791 | |
8 | G | A | -0.6998 | |
9 | G | A | 0.1024 | |
10 | G | A | 0.8243 | |
11 | L | A | 1.3995 | |
12 | V | A | 0.0275 | |
13 | Q | A | -1.2115 | |
14 | P | A | -1.4574 | |
15 | G | A | -1.3383 | |
16 | G | A | -1.0815 | |
17 | S | A | -1.3109 | |
18 | L | A | -1.1437 | |
19 | R | A | -2.3505 | |
20 | L | A | 0.0000 | |
21 | S | A | -0.5375 | |
22 | C | A | 0.0000 | |
23 | A | A | -0.1973 | |
24 | A | A | -0.5294 | |
25 | S | A | -0.7928 | |
26 | G | A | -0.9760 | |
27 | S | A | -0.5582 | |
28 | M | A | 0.1589 | |
29 | D | A | -0.9545 | |
30 | F | A | -0.0035 | |
31 | P | A | -0.3896 | |
32 | F | A | -0.7933 | |
33 | S | A | -1.1846 | |
34 | S | A | -1.0789 | |
35 | Y | A | 0.0000 | |
36 | S | A | 0.0000 | |
37 | L | A | 0.0000 | |
38 | G | A | 0.0000 | |
39 | W | A | 0.0000 | |
40 | F | A | 0.0000 | |
41 | R | A | 0.0000 | |
42 | Q | A | -0.8556 | |
43 | A | A | -1.1036 | |
44 | P | A | -1.1370 | |
45 | G | A | -1.3500 | |
46 | Q | A | -1.9003 | |
47 | G | A | -1.3368 | |
48 | L | A | -0.8171 | |
49 | E | A | -1.5625 | |
50 | A | A | -1.1597 | |
51 | V | A | 0.0000 | |
52 | A | A | 0.0000 | |
53 | A | A | 0.0000 | |
54 | I | A | 0.0000 | |
55 | S | A | 0.0000 | |
56 | S | A | -2.0132 | |
57 | D | A | -2.5329 | |
58 | G | A | -1.7583 | |
59 | K | A | -1.9719 | |
60 | Y | A | 0.1084 | |
61 | T | A | 0.2532 | |
62 | Y | A | -0.1942 | |
63 | Y | A | -1.0614 | |
64 | A | A | -1.4793 | |
65 | D | A | -2.3779 | |
66 | S | A | -1.7683 | |
67 | V | A | 0.0000 | |
68 | K | A | -2.5163 | |
69 | G | A | -1.7148 | |
70 | R | A | -1.4090 | |
71 | F | A | 0.0000 | |
72 | T | A | -1.0260 | |
73 | I | A | 0.0000 | |
74 | S | A | -0.7880 | |
75 | R | A | -1.3370 | |
76 | D | A | -1.8590 | |
77 | N | A | -2.0462 | |
78 | S | A | -1.7893 | |
79 | K | A | -2.5290 | |
80 | N | A | -1.9533 | |
81 | T | A | 0.0000 | |
82 | L | A | 0.0000 | |
83 | Y | A | 0.0000 | |
84 | L | A | 0.0000 | |
85 | Q | A | -1.7786 | |
86 | M | A | 0.0000 | |
87 | N | A | -1.4298 | |
88 | S | A | -1.1625 | |
89 | L | A | 0.0000 | |
90 | R | A | -2.1448 | |
91 | A | A | -1.6184 | |
92 | E | A | -2.2107 | |
93 | D | A | 0.0000 | |
94 | T | A | -0.4155 | |
95 | A | A | 0.0000 | |
96 | V | A | 0.7820 | |
97 | Y | A | 0.0000 | |
98 | Y | A | 0.3844 | |
99 | C | A | 0.0000 | |
100 | A | A | 0.0000 | |
101 | A | A | 0.0000 | |
102 | R | A | -2.3386 | |
103 | E | A | -2.6511 | |
104 | S | A | -2.1996 | |
105 | E | A | -1.8272 | |
106 | A | A | 0.0000 | |
107 | F | A | 1.3270 | |
108 | N | A | -0.5305 | |
109 | P | A | -0.9778 | |
110 | L | A | 0.0000 | |
111 | D | A | -2.4987 | |
112 | P | A | -1.6609 | |
113 | S | A | -1.6025 | |
114 | R | A | -2.4680 | |
115 | Y | A | 0.0000 | |
116 | D | A | -2.3523 | |
117 | Y | A | -1.3883 | |
118 | W | A | -0.2431 | |
119 | G | A | -0.0241 | |
120 | Q | A | -0.7886 | |
121 | G | A | 0.0000 | |
122 | T | A | 0.6662 | |
123 | L | A | 1.6886 | |
124 | V | A | 0.0000 | |
125 | T | A | 0.4024 | |
126 | V | A | 0.0000 | |
127 | S | A | -0.5014 |