| Chain sequence(s) |
A: AMQLQLVESGGGLVQPGGSLRLSCAASGFSLDPYVIGWFRQAPGKEREGVSCITSRAASRTSVDSVNERFTISRDNAKNTVDLHINNLKPEDSGVYYCAAVPPAKLPLFSLCRSLPAKYDYWGQGTQVTVSSAHHSEDPSGSYPYDVPDYAGSGASAYRPSRTLCGGELVDTLQLVCGDRGFYFSRPASRVSRRPRGIVEECCFRSCDLALLETYCATPAKSEAAALEHHHHHH
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:51)
[INFO] Main: Simulation completed successfully. (00:02:52)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | 0.1382 | |
| 2 | M | A | 0.3858 | |
| 3 | Q | A | -0.6323 | |
| 4 | L | A | 0.0000 | |
| 5 | Q | A | -0.3771 | |
| 6 | L | A | 0.0000 | |
| 7 | V | A | -0.1932 | |
| 8 | E | A | 0.0000 | |
| 9 | S | A | 0.0000 | |
| 10 | G | A | -0.6916 | |
| 11 | G | A | -0.7212 | |
| 12 | G | A | -0.0967 | |
| 13 | L | A | 0.3268 | |
| 14 | V | A | 0.0000 | |
| 15 | Q | A | -1.7409 | |
| 16 | P | A | -1.8039 | |
| 17 | G | A | -1.8379 | |
| 18 | G | A | -1.4082 | |
| 19 | S | A | -1.5183 | |
| 20 | L | A | -1.0711 | |
| 21 | R | A | -2.0773 | |
| 22 | L | A | 0.0000 | |
| 23 | S | A | 0.0000 | |
| 24 | C | A | 0.0000 | |
| 25 | A | A | 0.0000 | |
| 26 | A | A | 0.0000 | |
| 27 | S | A | 0.0000 | |
| 28 | G | A | 0.3552 | |
| 29 | F | A | 0.7422 | |
| 30 | S | A | -0.0664 | |
| 31 | L | A | 0.0000 | |
| 32 | D | A | -1.5011 | |
| 33 | P | A | -0.8535 | |
| 34 | Y | A | -0.5023 | |
| 35 | V | A | 0.0000 | |
| 36 | I | A | 0.0000 | |
| 37 | G | A | 0.0000 | |
| 38 | W | A | 0.0000 | |
| 39 | F | A | 0.0000 | |
| 40 | R | A | -1.2915 | |
| 41 | Q | A | -1.9737 | |
| 42 | A | A | -1.9535 | |
| 43 | P | A | -1.3780 | |
| 44 | G | A | -1.9161 | |
| 45 | K | A | -3.2671 | |
| 46 | E | A | -3.3950 | |
| 47 | R | A | -2.6500 | |
| 48 | E | A | -2.1191 | |
| 49 | G | A | 0.0000 | |
| 50 | V | A | 0.0000 | |
| 51 | S | A | 0.0000 | |
| 52 | C | A | 0.0000 | |
| 53 | I | A | 0.0000 | |
| 54 | T | A | -1.0981 | |
| 55 | S | A | -1.6200 | |
| 56 | R | A | -2.2589 | |
| 57 | A | A | -1.5923 | |
| 58 | A | A | -0.9803 | |
| 59 | S | A | -1.2222 | |
| 60 | R | A | -1.9064 | |
| 61 | T | A | -1.0746 | |
| 62 | S | A | -0.7682 | |
| 63 | V | A | 0.0008 | |
| 64 | D | A | -0.4004 | |
| 65 | S | A | -0.5748 | |
| 66 | V | A | 0.4815 | |
| 67 | N | A | -1.6406 | |
| 68 | E | A | -2.3064 | |
| 69 | R | A | -1.8456 | |
| 70 | F | A | 0.0000 | |
| 71 | T | A | -1.2687 | |
| 72 | I | A | 0.0000 | |
| 73 | S | A | -1.0004 | |
| 74 | R | A | -1.2486 | |
| 75 | D | A | -1.5047 | |
| 76 | N | A | -1.5126 | |
| 77 | A | A | -0.7300 | |
| 78 | K | A | -1.3739 | |
| 79 | N | A | -0.9381 | |
| 80 | T | A | 0.0000 | |
| 81 | V | A | 0.0000 | |
| 82 | D | A | -1.1059 | |
| 83 | L | A | 0.0000 | |
| 84 | H | A | -1.2291 | |
| 85 | I | A | 0.0000 | |
| 86 | N | A | -2.2392 | |
| 87 | N | A | -2.5701 | |
| 88 | L | A | 0.0000 | |
| 89 | K | A | -2.4443 | |
| 90 | P | A | -1.8567 | |
| 91 | E | A | -2.2696 | |
| 92 | D | A | 0.0000 | |
| 93 | S | A | -1.0752 | |
| 94 | G | A | -1.0300 | |
| 95 | V | A | -0.5408 | |
| 96 | Y | A | 0.0000 | |
| 97 | Y | A | -0.3271 | |
| 98 | C | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | A | A | 0.0000 | |
| 101 | V | A | 0.0000 | |
| 102 | P | A | -0.7367 | |
| 103 | P | A | -0.2848 | |
| 104 | A | A | -0.3306 | |
| 105 | K | A | -0.9968 | |
| 106 | L | A | 0.0000 | |
| 107 | P | A | 0.4068 | |
| 108 | L | A | 1.5634 | |
| 109 | F | A | 0.5399 | |
| 110 | S | A | 0.1078 | |
| 111 | L | A | 0.4661 | |
| 112 | C | A | 0.0000 | |
| 113 | R | A | -1.5188 | |
| 114 | S | A | -0.8857 | |
| 115 | L | A | -0.4692 | |
| 116 | P | A | -0.7572 | |
| 117 | A | A | -0.4201 | |
| 118 | K | A | -1.1205 | |
| 119 | Y | A | 0.0000 | |
| 120 | D | A | -1.1894 | |
| 121 | Y | A | -0.3678 | |
| 122 | W | A | -0.0256 | |
| 123 | G | A | -0.3555 | |
| 124 | Q | A | -1.0495 | |
| 125 | G | A | 0.0000 | |
| 126 | T | A | 0.0000 | |
| 127 | Q | A | -1.0567 | |
| 128 | V | A | 0.0000 | |
| 129 | T | A | -0.5891 | |
| 130 | V | A | 0.0000 | |
| 131 | S | A | -1.1030 | |
| 132 | S | A | -1.1295 | |
| 133 | A | A | -0.9645 | |
| 134 | H | A | -2.0794 | |
| 135 | H | A | -2.4189 | |
| 136 | S | A | -2.6029 | |
| 137 | E | A | -3.4826 | |
| 138 | D | A | -3.2573 | |
| 139 | P | A | -1.8986 | |
| 140 | S | A | -1.2753 | |
| 141 | G | A | -1.0516 | |
| 142 | S | A | -0.0329 | |
| 143 | Y | A | 1.0444 | |
| 144 | P | A | 0.6151 | |
| 145 | Y | A | 1.2571 | |
| 146 | D | A | -0.4469 | |
| 147 | V | A | 0.9925 | |
| 148 | P | A | -0.0644 | |
| 149 | D | A | -1.0694 | |
| 150 | Y | A | 0.5506 | |
| 151 | A | A | -0.1967 | |
| 152 | G | A | -0.4774 | |
| 153 | S | A | -0.4500 | |
| 154 | G | A | -0.6938 | |
| 155 | A | A | -0.1474 | |
| 156 | S | A | -0.2254 | |
| 157 | A | A | -0.0834 | |
| 158 | Y | A | 0.2842 | |
| 159 | R | A | -1.7027 | |
| 160 | P | A | -1.4015 | |
| 161 | S | A | -2.1331 | |
| 162 | R | A | -2.6833 | |
| 163 | T | A | -1.3834 | |
| 164 | L | A | -1.1287 | |
| 165 | C | A | -0.4302 | |
| 166 | G | A | -1.0993 | |
| 167 | G | A | -1.6702 | |
| 168 | E | A | -2.4660 | |
| 169 | L | A | 0.0000 | |
| 170 | V | A | 0.0000 | |
| 171 | D | A | -2.3153 | |
| 172 | T | A | -0.7708 | |
| 173 | L | A | 0.0000 | |
| 174 | Q | A | -1.1912 | |
| 175 | L | A | 0.5005 | |
| 176 | V | A | 0.2256 | |
| 177 | C | A | 0.0000 | |
| 178 | G | A | -1.2051 | |
| 179 | D | A | -2.2958 | |
| 180 | R | A | -1.8817 | |
| 181 | G | A | -0.8736 | |
| 182 | F | A | -0.3922 | |
| 183 | Y | A | 0.2293 | |
| 184 | F | A | 0.0000 | |
| 185 | S | A | -0.9854 | |
| 186 | R | A | -1.4474 | |
| 187 | P | A | -1.3039 | |
| 188 | A | A | -1.7290 | |
| 189 | S | A | -1.4841 | |
| 190 | R | A | -1.7437 | |
| 191 | V | A | 0.0644 | |
| 192 | S | A | -1.4758 | |
| 193 | R | A | -2.9188 | |
| 194 | R | A | -3.2600 | |
| 195 | P | A | -2.5930 | |
| 196 | R | A | -2.2891 | |
| 197 | G | A | -1.1694 | |
| 198 | I | A | 0.0000 | |
| 199 | V | A | 0.0000 | |
| 200 | E | A | -0.4220 | |
| 201 | E | A | -0.7869 | |
| 202 | C | A | 0.0000 | |
| 203 | C | A | 0.0000 | |
| 204 | F | A | 0.7246 | |
| 205 | R | A | -1.3695 | |
| 206 | S | A | -1.5963 | |
| 207 | C | A | -1.1948 | |
| 208 | D | A | -1.3989 | |
| 209 | L | A | 0.6447 | |
| 210 | A | A | 0.1585 | |
| 211 | L | A | -0.0570 | |
| 212 | L | A | 0.0000 | |
| 213 | E | A | -0.3525 | |
| 214 | T | A | -0.1185 | |
| 215 | Y | A | 0.0000 | |
| 216 | C | A | -0.6148 | |
| 217 | A | A | -0.6361 | |
| 218 | T | A | -0.6790 | |
| 219 | P | A | -1.2375 | |
| 220 | A | A | -1.3332 | |
| 221 | K | A | -2.3208 | |
| 222 | S | A | -1.7474 | |
| 223 | E | A | -2.1800 | |
| 224 | A | A | -1.1381 | |
| 225 | A | A | -1.2405 | |
| 226 | A | A | -1.1505 | |
| 227 | L | A | -0.6678 | |
| 228 | E | A | -2.6831 | |
| 229 | H | A | -2.6245 | |
| 230 | H | A | -2.7582 | |
| 231 | H | A | -3.0468 | |
| 232 | H | A | -3.0656 | |
| 233 | H | A | -2.9435 | |
| 234 | H | A | -2.2125 |