| Chain sequence(s) |
A: EVQLVESGGGLVQPGGSLRLSCAASGFTISNYGMSWVRQAPGKGLEWVSAITVSGGRAYYADSVKGRFTISRDNAKNTVYLQMNSLRAEDTAVYYCARDRVVVAGIAFDYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 2 | E | A | -2.0091 | |
| 3 | V | A | -0.9049 | |
| 4 | Q | A | -0.8203 | |
| 5 | L | A | 0.0000 | |
| 6 | V | A | 1.2148 | |
| 7 | E | A | 0.5059 | |
| 8 | S | A | -0.1298 | |
| 9 | G | A | -0.6620 | |
| 10 | G | A | 0.0885 | |
| 11 | G | A | 0.6893 | |
| 12 | L | A | 1.4013 | |
| 13 | V | A | -0.0675 | |
| 14 | Q | A | -1.4204 | |
| 15 | P | A | -1.9326 | |
| 16 | G | A | -1.5077 | |
| 17 | G | A | -1.0682 | |
| 18 | S | A | -1.2800 | |
| 19 | L | A | -0.9607 | |
| 20 | R | A | -2.0170 | |
| 21 | L | A | 0.0000 | |
| 22 | S | A | -0.4031 | |
| 23 | C | A | 0.0000 | |
| 24 | A | A | -0.0133 | |
| 25 | A | A | 0.0000 | |
| 26 | S | A | -0.6810 | |
| 27 | G | A | -1.0979 | |
| 28 | F | A | -0.5973 | |
| 29 | T | A | -0.4980 | |
| 30 | I | A | 0.0000 | |
| 31 | S | A | -0.8323 | |
| 32 | N | A | -0.5075 | |
| 33 | Y | A | 0.3680 | |
| 34 | G | A | 0.0000 | |
| 35 | M | A | 0.0000 | |
| 36 | S | A | 0.0000 | |
| 37 | W | A | 0.0000 | |
| 38 | V | A | 0.0000 | |
| 39 | R | A | 0.0000 | |
| 40 | Q | A | -0.3652 | |
| 41 | A | A | -0.9749 | |
| 42 | P | A | -0.9429 | |
| 43 | G | A | -1.4109 | |
| 44 | K | A | -2.1067 | |
| 45 | G | A | -0.9589 | |
| 46 | L | A | 0.4780 | |
| 47 | E | A | -0.4045 | |
| 48 | W | A | 0.2954 | |
| 49 | V | A | 0.0000 | |
| 50 | S | A | 0.0000 | |
| 51 | A | A | 0.0000 | |
| 52 | I | A | 0.0000 | |
| 53 | T | A | 0.0000 | |
| 54 | V | A | 0.1689 | |
| 55 | S | A | -0.7302 | |
| 56 | G | A | -1.1846 | |
| 57 | G | A | -1.2924 | |
| 58 | R | A | -1.7646 | |
| 59 | A | A | -0.6976 | |
| 60 | Y | A | -0.1892 | |
| 61 | Y | A | -0.4682 | |
| 62 | A | A | -1.1317 | |
| 63 | D | A | -2.3920 | |
| 64 | S | A | -1.5687 | |
| 65 | V | A | 0.0000 | |
| 66 | K | A | -2.5112 | |
| 67 | G | A | -1.7089 | |
| 68 | R | A | -1.2636 | |
| 69 | F | A | 0.0000 | |
| 70 | T | A | -0.7455 | |
| 71 | I | A | 0.0000 | |
| 72 | S | A | -0.6513 | |
| 73 | R | A | -0.9228 | |
| 74 | D | A | -1.4969 | |
| 75 | N | A | -1.5995 | |
| 76 | A | A | -1.3079 | |
| 77 | K | A | -2.2464 | |
| 78 | N | A | -1.6815 | |
| 79 | T | A | -0.9410 | |
| 80 | V | A | 0.0000 | |
| 81 | Y | A | -0.5655 | |
| 82 | L | A | 0.0000 | |
| 83 | Q | A | -1.2008 | |
| 84 | M | A | 0.0000 | |
| 85 | N | A | -1.4502 | |
| 86 | S | A | -1.3003 | |
| 87 | L | A | 0.0000 | |
| 88 | R | A | -2.5002 | |
| 89 | A | A | -1.8392 | |
| 90 | E | A | -2.2721 | |
| 91 | D | A | 0.0000 | |
| 92 | T | A | -0.4606 | |
| 93 | A | A | 0.0000 | |
| 94 | V | A | 0.9475 | |
| 95 | Y | A | 0.0000 | |
| 96 | Y | A | 0.6448 | |
| 97 | C | A | 0.0000 | |
| 98 | A | A | 0.0000 | |
| 99 | R | A | 0.0000 | |
| 100 | D | A | 0.0000 | |
| 101 | R | A | 0.3055 | |
| 102 | V | A | 1.9512 | |
| 103 | V | A | 2.3334 | |
| 104 | V | A | 2.2777 | |
| 105 | A | A | 1.6515 | |
| 106 | G | A | 0.0000 | |
| 107 | I | A | 2.4143 | |
| 108 | A | A | 0.9105 | |
| 109 | F | A | 0.7725 | |
| 110 | D | A | -0.3990 | |
| 111 | Y | A | 0.4755 | |
| 112 | W | A | 0.6836 | |
| 113 | G | A | 0.0000 | |
| 114 | Q | A | -0.6111 | |
| 115 | G | A | 0.1563 | |
| 116 | T | A | 0.6095 | |
| 117 | L | A | 1.5594 | |
| 118 | V | A | 0.0000 | |
| 119 | T | A | 0.3356 | |
| 120 | V | A | 0.0000 | |
| 121 | S | A | -0.8116 | |
| 122 | S | A | -0.5052 |