Chain sequence(s) |
H: QVQLQESGGDSVQAGGSLRLSCAASGSTYSSNCMGWFRQAPGKEREEVASMSIRSGRTYYSDSVKGRFTISHDGSKNTLYLQMNSLKAEDTAMYYCAAAYGGSRCDYNYRGQGTQVTVSS
input PDB |
Selected Chain(s) | H |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:00) [INFO] Main: Simulation completed successfully. (00:01:01) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.3640 | |
2 | V | H | -1.1711 | |
3 | Q | H | -1.5532 | |
4 | L | H | 0.0000 | |
5 | Q | H | -2.0006 | |
6 | E | H | -1.4935 | |
7 | S | H | -1.3951 | |
8 | G | H | -1.4593 | |
9 | G | H | -1.6766 | |
11 | D | H | -2.2807 | |
12 | S | H | -1.3091 | |
13 | V | H | -1.0757 | |
14 | Q | H | -1.5566 | |
15 | A | H | -1.5666 | |
16 | G | H | -1.2879 | |
17 | G | H | -1.0281 | |
18 | S | H | -1.0342 | |
19 | L | H | -1.1066 | |
20 | R | H | -1.7836 | |
21 | L | H | 0.0000 | |
22 | S | H | -0.7912 | |
23 | C | H | 0.0000 | |
24 | A | H | -1.0177 | |
25 | A | H | -0.9337 | |
26 | S | H | -1.1067 | |
27 | G | H | -0.7782 | |
28 | S | H | -0.2518 | |
29 | T | H | 0.2846 | |
30 | Y | H | 1.3577 | |
35 | S | H | 0.0000 | |
36 | S | H | 0.0000 | |
37 | N | H | -0.0411 | |
38 | C | H | -0.6201 | |
39 | M | H | 0.0000 | |
40 | G | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | F | H | -0.7213 | |
43 | R | H | 0.0000 | |
44 | Q | H | -2.0590 | |
45 | A | H | -1.9176 | |
46 | P | H | -1.3701 | |
47 | G | H | -1.9556 | |
48 | K | H | -3.4460 | |
49 | E | H | -3.7440 | |
50 | R | H | -3.0986 | |
51 | E | H | -3.0023 | |
52 | E | H | -1.2713 | |
53 | V | H | 0.0000 | |
54 | A | H | 0.0000 | |
55 | S | H | 0.0000 | |
56 | M | H | 0.0000 | |
57 | S | H | -1.0007 | |
58 | I | H | -1.1048 | |
59 | R | H | -2.1847 | |
62 | S | H | -1.6888 | |
63 | G | H | -1.8434 | |
64 | R | H | -2.0366 | |
65 | T | H | -0.3494 | |
66 | Y | H | 0.5297 | |
67 | Y | H | -0.2491 | |
68 | S | H | -1.2976 | |
69 | D | H | -2.3746 | |
70 | S | H | -1.8354 | |
71 | V | H | 0.0000 | |
72 | K | H | -2.4650 | |
74 | G | H | -1.7588 | |
75 | R | H | -1.6767 | |
76 | F | H | 0.0000 | |
77 | T | H | -0.6319 | |
78 | I | H | 0.0000 | |
79 | S | H | -0.5115 | |
80 | H | H | -0.8419 | |
81 | D | H | -1.4002 | |
82 | G | H | -1.6896 | |
83 | S | H | -1.5431 | |
84 | K | H | -2.3665 | |
85 | N | H | -1.6385 | |
86 | T | H | -1.2603 | |
87 | L | H | 0.0000 | |
88 | Y | H | -0.3875 | |
89 | L | H | 0.0000 | |
90 | Q | H | -0.9694 | |
91 | M | H | 0.0000 | |
92 | N | H | -1.2614 | |
93 | S | H | -1.1711 | |
94 | L | H | 0.0000 | |
95 | K | H | -2.2743 | |
96 | A | H | -1.6880 | |
97 | E | H | -2.2500 | |
98 | D | H | 0.0000 | |
99 | T | H | -1.1216 | |
100 | A | H | 0.0000 | |
101 | M | H | -0.3072 | |
102 | Y | H | 0.0000 | |
103 | Y | H | -0.9138 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | A | H | 0.0000 | |
107 | A | H | 0.0000 | |
108 | Y | H | 0.5857 | |
109 | G | H | -0.7287 | |
110 | G | H | -1.0401 | |
111 | S | H | -1.4232 | |
112 | R | H | -2.3317 | |
113 | C | H | -1.6737 | |
114 | D | H | -2.3005 | |
115 | Y | H | -1.5828 | |
116 | N | H | -1.5241 | |
117 | Y | H | -1.3199 | |
118 | R | H | -2.3455 | |
119 | G | H | 0.0000 | |
120 | Q | H | -2.0103 | |
121 | G | H | -1.2189 | |
122 | T | H | -1.1619 | |
123 | Q | H | -1.1870 | |
124 | V | H | 0.0000 | |
125 | T | H | -1.2106 | |
126 | V | H | 0.0000 | |
127 | S | H | -1.0698 | |
128 | S | H | -0.8163 |