Project name: query_structure

Status: done

Started: 2026-03-16 23:26:29
Settings
Chain sequence(s) A: GLPVCGESCFGGSCYTPGCSCTWPICTRD
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:13)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:14)
Show buried residues

Minimal score value
-2.682
Maximal score value
1.9499
Average score
0.1792
Total score value
5.1969

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A 0.3328
2 L A 1.1264
3 P A -0.3810
4 V A 0.0976
5 C A -0.2879
6 G A -0.4307
7 E A -0.0195
8 S A 0.7143
9 C A 0.0000
10 F A 1.9499
11 G A 0.5248
12 G A 0.3666
13 S A 0.4863
14 C A 0.8450
15 Y A 1.1408
16 T A 0.1051
17 P A -0.3414
18 G A -1.1903
19 C A -0.9670
20 S A -0.3180
21 C A 1.0284
22 T A 1.0965
23 W A 1.8821
24 P A 1.5748
25 I A 1.3785
26 C A 0.0000
27 T A -0.5610
28 R A -2.2742
29 D A -2.6820
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Laboratory of Theory of Biopolymers 2018