| Chain sequence(s) |
A: GLPVCGESCFGGSCYTPGCSCTWPICTRD
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:13)
[INFO] Main: Simulation completed successfully. (00:00:14)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | 0.3328 | |
| 2 | L | A | 1.1264 | |
| 3 | P | A | -0.3810 | |
| 4 | V | A | 0.0976 | |
| 5 | C | A | -0.2879 | |
| 6 | G | A | -0.4307 | |
| 7 | E | A | -0.0195 | |
| 8 | S | A | 0.7143 | |
| 9 | C | A | 0.0000 | |
| 10 | F | A | 1.9499 | |
| 11 | G | A | 0.5248 | |
| 12 | G | A | 0.3666 | |
| 13 | S | A | 0.4863 | |
| 14 | C | A | 0.8450 | |
| 15 | Y | A | 1.1408 | |
| 16 | T | A | 0.1051 | |
| 17 | P | A | -0.3414 | |
| 18 | G | A | -1.1903 | |
| 19 | C | A | -0.9670 | |
| 20 | S | A | -0.3180 | |
| 21 | C | A | 1.0284 | |
| 22 | T | A | 1.0965 | |
| 23 | W | A | 1.8821 | |
| 24 | P | A | 1.5748 | |
| 25 | I | A | 1.3785 | |
| 26 | C | A | 0.0000 | |
| 27 | T | A | -0.5610 | |
| 28 | R | A | -2.2742 | |
| 29 | D | A | -2.6820 |