Project name: GSGHKFF12

Status: done

Started: 2026-02-20 08:24:26
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Chain sequence(s) A: GSGHKFF
C: GSGHKFF
B: GSGHKFF
E: GSGHKFF
D: GSGHKFF
G: GSGHKFF
F: GSGHKFF
I: GSGHKFF
H: GSGHKFF
K: GSGHKFF
J: GSGHKFF
L: GSGHKFF
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:07:43)
[INFO]       Main:     Simulation completed successfully.                                          (00:07:46)
Show buried residues

Minimal score value
-1.643
Maximal score value
3.5154
Average score
0.0201
Total score value
1.6926

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.8275
2 S A -1.1874
3 G A -0.4641
4 H A -0.2667
5 K A 0.8960
6 F A 2.7397
7 F A 3.0916
1 G B -1.1410
2 S B -1.2263
3 G B -0.6273
4 H B -0.6364
5 K B 0.2434
6 F B 0.0000
7 F B 2.0654
1 G C -0.8788
2 S C -1.0062
3 G C -1.3250
4 H C -1.6430
5 K C -0.1744
6 F C 1.4724
7 F C 0.0000
1 G D -0.7599
2 S D -0.9291
3 G D -0.8852
4 H D -0.6595
5 K D 0.3385
6 F D 2.7373
7 F D 1.8215
1 G E -0.6876
2 S E -0.9564
3 G E -0.7963
4 H E -0.3503
5 K E 0.6570
6 F E 0.0000
7 F E 3.5154
1 G F -0.8216
2 S F -1.0378
3 G F -1.2618
4 H F -1.1544
5 K F -0.3298
6 F F 1.6031
7 F F 2.3420
1 G G -0.8584
2 S G -1.2115
3 G G -0.8901
4 H G -1.3558
5 K G -1.0716
6 F G 0.2750
7 F G 1.6097
1 G H -1.0404
2 S H -1.3721
3 G H -1.5029
4 H H -1.5129
5 K H -0.8970
6 F H 1.0978
7 F H 2.4893
1 G I -0.7188
2 S I -0.9796
3 G I -0.8582
4 H I -0.2668
5 K I 0.8655
6 F I 2.3763
7 F I 3.1488
1 G J -0.8030
2 S J -1.1648
3 G J -0.2095
4 H J 0.1526
5 K J 1.6238
6 F J 2.5878
7 F J 3.1099
1 G K -0.7458
2 S K -0.9391
3 G K -1.2191
4 H K -0.7012
5 K K 0.0888
6 F K 1.4880
7 F K 3.0430
1 G L -0.8276
2 S L -1.1956
3 G L -1.6228
4 H L -1.5193
5 K L -1.2609
6 F L 0.8139
7 F L 2.1777
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Laboratory of Theory of Biopolymers 2018