| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFADIVVNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEPVHEGADDRVSFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRCGPEGHPLPDEPPPSPLYVPPPPDSPYAVRPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPEDNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9488 | |
| 2 | L | A | 1.9745 | |
| 3 | P | A | 0.6604 | |
| 4 | P | A | 0.3485 | |
| 5 | T | A | 0.1045 | |
| 6 | T | A | 0.1252 | |
| 7 | P | A | 0.1506 | |
| 8 | V | A | 1.2083 | |
| 9 | A | A | 0.0165 | |
| 10 | K | A | -1.1491 | |
| 11 | V | A | -0.4053 | |
| 12 | Q | A | -1.5326 | |
| 13 | S | A | -1.5928 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3688 | |
| 16 | E | A | -2.4158 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4702 | |
| 20 | P | A | 0.1129 | |
| 21 | T | A | 0.1156 | |
| 22 | S | A | -0.1736 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1170 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1907 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7441 | |
| 31 | R | A | -2.5870 | |
| 32 | L | A | -0.7344 | |
| 33 | L | A | 1.2343 | |
| 34 | T | A | 1.4640 | |
| 35 | V | A | 2.0040 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | 0.2309 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | 0.1982 | |
| 40 | A | A | 0.0007 | |
| 41 | D | A | 0.0761 | |
| 42 | I | A | 1.9361 | |
| 43 | V | A | 2.6153 | |
| 44 | V | A | 1.9246 | |
| 45 | N | A | -0.4144 | |
| 46 | G | A | -0.2393 | |
| 47 | K | A | 0.0211 | |
| 48 | V | A | 2.3722 | |
| 49 | V | A | 2.8217 | |
| 50 | V | A | 1.8888 | |
| 51 | P | A | 0.7118 | |
| 52 | K | A | -0.0480 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1328 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4847 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2703 | |
| 70 | K | A | -1.8129 | |
| 71 | F | A | -0.6661 | |
| 72 | A | A | -0.5712 | |
| 73 | L | A | -0.8573 | |
| 74 | P | A | -1.2529 | |
| 75 | Q | A | -2.4693 | |
| 76 | K | A | -3.0919 | |
| 77 | D | A | -2.9901 | |
| 78 | F | A | -1.6342 | |
| 79 | Y | A | -1.9312 | |
| 80 | D | A | -2.7820 | |
| 81 | P | A | -2.3594 | |
| 82 | E | A | -3.0762 | |
| 83 | K | A | -3.4460 | |
| 84 | E | A | -2.5127 | |
| 85 | R | A | -1.3174 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6622 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9606 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3138 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7266 | |
| 99 | G | A | -0.5238 | |
| 100 | P | A | -0.3836 | |
| 101 | L | A | 0.0879 | |
| 102 | G | A | -0.1677 | |
| 103 | K | A | -0.5753 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4279 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.0912 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.2947 | |
| 110 | L | A | 0.1993 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1267 | |
| 113 | K | A | -0.6424 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.3031 | |
| 117 | T | A | -0.8058 | |
| 118 | E | A | -1.8628 | |
| 119 | N | A | -2.2310 | |
| 120 | P | A | -1.8574 | |
| 121 | T | A | -1.5524 | |
| 122 | E | A | -2.1966 | |
| 123 | P | A | -0.8386 | |
| 124 | V | A | -0.9386 | |
| 125 | H | A | -1.6359 | |
| 126 | E | A | -2.4972 | |
| 127 | G | A | -2.2297 | |
| 128 | A | A | -1.5928 | |
| 129 | D | A | -2.5099 | |
| 130 | D | A | -2.1374 | |
| 131 | R | A | -1.2170 | |
| 132 | V | A | 0.0609 | |
| 133 | S | A | 0.1716 | |
| 134 | F | A | 0.1449 | |
| 135 | S | A | -0.1339 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.6789 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2112 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5587 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2276 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1185 | |
| 157 | D | A | 0.3101 | |
| 158 | I | A | 0.8637 | |
| 159 | A | A | 0.1265 | |
| 160 | E | A | -1.4726 | |
| 161 | P | A | -0.2434 | |
| 162 | C | A | 0.1732 | |
| 163 | P | A | -0.1743 | |
| 164 | G | A | -0.0776 | |
| 165 | L | A | 0.5857 | |
| 166 | P | A | -0.1096 | |
| 167 | P | A | -0.3389 | |
| 168 | G | A | -0.4175 | |
| 169 | A | A | -0.0239 | |
| 170 | C | A | 0.7477 | |
| 171 | P | A | 0.5554 | |
| 172 | P | A | 0.7888 | |
| 173 | I | A | 2.0387 | |
| 174 | Q | A | 0.8363 | |
| 175 | L | A | 1.4264 | |
| 176 | V | A | 0.8240 | |
| 177 | N | A | -0.3170 | |
| 178 | S | A | 0.0337 | |
| 179 | V | A | 0.4390 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3773 | |
| 182 | D | A | 0.0835 | |
| 183 | G | A | -0.1583 | |
| 184 | D | A | -0.5535 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1324 | |
| 190 | F | A | 0.0552 | |
| 191 | G | A | -0.1032 | |
| 192 | N | A | -0.2702 | |
| 193 | M | A | -0.1286 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3997 | |
| 197 | E | A | -2.6090 | |
| 198 | L | A | -1.2109 | |
| 199 | Q | A | -2.5428 | |
| 200 | Q | A | -3.3359 | |
| 201 | D | A | -3.6005 | |
| 202 | R | A | -3.3494 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.4491 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3880 | |
| 211 | S | A | -1.7201 | |
| 212 | T | A | -1.4605 | |
| 213 | R | A | -2.1157 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1683 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2990 | |
| 220 | L | A | 0.5121 | |
| 221 | K | A | -1.2843 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9587 | |
| 224 | N | A | -1.6882 | |
| 225 | E | A | -1.3172 | |
| 226 | A | A | -0.6719 | |
| 227 | Y | A | -0.4532 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7078 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1386 | |
| 234 | F | A | 0.0287 | |
| 235 | G | A | -0.9419 | |
| 236 | R | A | -2.7220 | |
| 237 | R | A | -3.0497 | |
| 238 | E | A | -2.2134 | |
| 239 | Q | A | -0.1998 | |
| 240 | V | A | 1.5222 | |
| 241 | Y | A | 1.2511 | |
| 242 | A | A | 0.1867 | |
| 243 | R | A | -1.2022 | |
| 244 | H | A | -0.9999 | |
| 245 | F | A | 0.0380 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.5539 | |
| 249 | C | A | -1.2666 | |
| 250 | G | A | -1.1023 | |
| 251 | P | A | -1.0953 | |
| 252 | E | A | -1.3414 | |
| 253 | G | A | -1.2721 | |
| 254 | H | A | -1.4223 | |
| 255 | P | A | -1.2716 | |
| 256 | L | A | -0.3675 | |
| 257 | P | A | -1.0609 | |
| 258 | D | A | -1.9210 | |
| 259 | E | A | -1.5727 | |
| 260 | P | A | -1.1222 | |
| 261 | P | A | -0.4444 | |
| 262 | P | A | -0.1050 | |
| 263 | S | A | -0.0806 | |
| 264 | P | A | 0.5351 | |
| 265 | L | A | 1.5543 | |
| 266 | Y | A | 1.3748 | |
| 267 | V | A | 1.5980 | |
| 268 | P | A | 0.4464 | |
| 269 | P | A | 0.2773 | |
| 270 | P | A | -0.6254 | |
| 271 | P | A | -0.8909 | |
| 272 | D | A | -1.6791 | |
| 273 | S | A | -0.4890 | |
| 274 | P | A | -0.1137 | |
| 275 | Y | A | 1.1230 | |
| 276 | A | A | 0.6608 | |
| 277 | V | A | 1.2905 | |
| 278 | R | A | 0.5099 | |
| 279 | P | A | -0.2823 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.4093 | |
| 282 | D | A | -0.7805 | |
| 283 | Y | A | 0.9449 | |
| 284 | F | A | 0.7289 | |
| 285 | G | A | 0.2171 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9310 | |
| 291 | L | A | 1.6394 | |
| 292 | V | A | 0.6748 | |
| 293 | S | A | -0.1400 | |
| 294 | S | A | -0.9538 | |
| 295 | D | A | -1.8387 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1497 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6526 | |
| 301 | R | A | -1.8947 | |
| 302 | P | A | -0.9702 | |
| 303 | F | A | -0.1913 | |
| 304 | W | A | -0.5220 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0831 | |
| 307 | R | A | -2.9193 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7831 | |
| 310 | G | A | -1.4202 | |
| 311 | N | A | -1.3881 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9461 | |
| 319 | N | A | -0.9009 | |
| 320 | E | A | -1.0607 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3046 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1171 | |
| 333 | N | A | 0.4182 | |
| 334 | F | A | 1.4446 | |
| 335 | T | A | 0.7383 | |
| 336 | I | A | 0.3954 | |
| 337 | S | A | -0.9822 | |
| 338 | Q | A | -1.7427 | |
| 339 | Q | A | -1.3009 | |
| 340 | L | A | 0.6639 | |
| 341 | C | A | 0.2814 | |
| 342 | T | A | -0.3641 | |
| 343 | P | A | -1.0118 | |
| 344 | E | A | -2.5087 | |
| 345 | D | A | -2.5698 | |
| 346 | N | A | -1.6373 | |
| 347 | V | A | 0.4800 | |
| 348 | Y | A | 0.9259 | |
| 349 | D | A | -0.1664 | |
| 350 | P | A | -0.3919 | |
| 351 | S | A | -0.3126 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.7686 | |
| 354 | K | A | -1.7811 | |
| 355 | N | A | -1.7622 | |
| 356 | Y | A | -0.1212 | |
| 357 | L | A | 0.5614 | |
| 358 | R | A | 0.8861 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4660 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | 0.0034 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.8829 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6459 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2762 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3266 | |
| 376 | L | A | -1.7573 | |
| 377 | D | A | -2.0166 | |
| 378 | P | A | -1.0544 | |
| 379 | G | A | -1.0138 | |
| 380 | V | A | -0.9240 | |
| 381 | L | A | -0.5329 | |
| 382 | A | A | -0.6519 | |
| 383 | H | A | -0.8411 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3786 | |
| 386 | T | A | -0.5570 | |
| 387 | M | A | -0.3238 | |
| 388 | N | A | -0.8680 | |
| 389 | P | A | -1.2738 | |
| 390 | T | A | -1.5813 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5574 | |
| 393 | E | A | -2.9768 | |
| 394 | N | A | -2.7548 | |
| 395 | W | A | -1.5682 | |
| 396 | N | A | -1.2322 | |
| 397 | L | A | -0.2361 | |
| 398 | G | A | 0.5280 | |
| 399 | F | A | 2.4151 | |
| 400 | V | A | 1.8411 | |
| 401 | P | A | 0.0568 | |
| 402 | P | A | -1.9742 | |
| 403 | K | A | -3.4906 | |
| 404 | E | A | -3.9883 | |
| 405 | R | A | -4.4094 | |
| 406 | E | A | -3.9805 | |
| 407 | D | A | -2.9313 | |
| 408 | P | A | -1.8008 | |
| 409 | Y | A | -0.9745 | |
| 410 | K | A | -2.0943 | |
| 411 | G | A | -0.6285 | |
| 412 | L | A | 0.6742 | |
| 413 | I | A | 1.5836 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4014 | |
| 416 | E | A | -1.6842 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9048 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0021 | |
| 421 | E | A | -2.6807 | |
| 422 | R | A | -2.4178 | |
| 423 | F | A | -1.1948 | |
| 424 | S | A | -1.4063 | |
| 425 | Q | A | -1.8777 | |
| 426 | D | A | -2.8838 | |
| 427 | L | A | -1.9830 | |
| 428 | D | A | -2.7649 | |
| 429 | Q | A | -2.6028 | |
| 430 | F | A | -1.4251 | |
| 431 | A | A | -0.8886 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5524 | |
| 435 | K | A | -0.7049 | |
| 436 | F | A | 0.1584 | |
| 437 | L | A | 1.0382 | |
| 438 | Y | A | 0.8344 | |
| 439 | Q | A | -0.2592 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine