Project name: query_structure

Status: done

Started: 2026-03-16 23:11:28
Settings
Chain sequence(s) A: ETCLLGTCYTPGCTCKRPVCYKNGHPTCG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:54)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:54)
Show buried residues

Minimal score value
-2.1705
Maximal score value
1.9194
Average score
-0.4762
Total score value
-13.8086

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E A -0.0665
2 T A 0.1411
3 C A 0.0000
4 L A 1.5076
5 L A 1.9194
6 G A 0.3361
7 T A 0.6217
8 C A 0.7070
9 Y A 1.1317
10 T A 0.2080
11 P A -0.2005
12 G A -0.6926
13 C A -0.7454
14 T A -0.8625
15 C A -0.4631
16 K A -2.0774
17 R A -1.8074
18 P A -0.7671
19 V A -0.4444
20 C A 0.0000
21 Y A -1.4901
22 K A -2.0123
23 N A -2.1705
24 G A -1.9142
25 H A -1.8018
26 P A -1.2840
27 T A -1.0131
28 C A 0.0000
29 G A -0.5683
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Laboratory of Theory of Biopolymers 2018