| Chain sequence(s) |
A: ETCLLGTCYTPGCTCKRPVCYKNGHPTCG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:54)
[INFO] Main: Simulation completed successfully. (00:00:54)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -0.0665 | |
| 2 | T | A | 0.1411 | |
| 3 | C | A | 0.0000 | |
| 4 | L | A | 1.5076 | |
| 5 | L | A | 1.9194 | |
| 6 | G | A | 0.3361 | |
| 7 | T | A | 0.6217 | |
| 8 | C | A | 0.7070 | |
| 9 | Y | A | 1.1317 | |
| 10 | T | A | 0.2080 | |
| 11 | P | A | -0.2005 | |
| 12 | G | A | -0.6926 | |
| 13 | C | A | -0.7454 | |
| 14 | T | A | -0.8625 | |
| 15 | C | A | -0.4631 | |
| 16 | K | A | -2.0774 | |
| 17 | R | A | -1.8074 | |
| 18 | P | A | -0.7671 | |
| 19 | V | A | -0.4444 | |
| 20 | C | A | 0.0000 | |
| 21 | Y | A | -1.4901 | |
| 22 | K | A | -2.0123 | |
| 23 | N | A | -2.1705 | |
| 24 | G | A | -1.9142 | |
| 25 | H | A | -1.8018 | |
| 26 | P | A | -1.2840 | |
| 27 | T | A | -1.0131 | |
| 28 | C | A | 0.0000 | |
| 29 | G | A | -0.5683 |