| Chain sequence(s) |
A: GVPCAESCVWIPCTVTALLGCSCKDKVCYLD
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:32)
[INFO] Main: Simulation completed successfully. (00:00:33)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.3143 | |
| 2 | V | A | 1.3608 | |
| 3 | P | A | 0.5590 | |
| 4 | C | A | 0.9166 | |
| 5 | A | A | 0.5178 | |
| 6 | E | A | 0.4002 | |
| 7 | S | A | 0.0840 | |
| 8 | C | A | 0.4598 | |
| 9 | V | A | 1.1744 | |
| 10 | W | A | 2.2173 | |
| 11 | I | A | 2.4114 | |
| 12 | P | A | 1.2898 | |
| 13 | C | A | 0.0000 | |
| 14 | T | A | 1.5012 | |
| 15 | V | A | 2.2979 | |
| 16 | T | A | 1.8971 | |
| 17 | A | A | 1.7547 | |
| 18 | L | A | 2.5801 | |
| 19 | L | A | 2.4812 | |
| 20 | G | A | 0.7936 | |
| 21 | C | A | 0.0000 | |
| 22 | S | A | -0.3038 | |
| 23 | C | A | -0.7959 | |
| 24 | K | A | -2.6040 | |
| 25 | D | A | -2.8701 | |
| 26 | K | A | -1.9980 | |
| 27 | V | A | -0.9185 | |
| 28 | C | A | 0.0000 | |
| 29 | Y | A | -0.1481 | |
| 30 | L | A | 0.4144 | |
| 31 | D | A | -1.4348 |