| Chain sequence(s) |
H: EVQLVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKRLEWVATISSGGSYIYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCARHVLLYYNMDYWGQGTSVTVSS
L: DIQMNQSPSSLSASLGDTITITCHASQNINVWLSWYQQKPGNIPKLLIYKASNLHTGVPSRFSGSGSGTGFTLTISSLQPEDIATYYCQQGQSFPWTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:09)
[INFO] Main: Simulation completed successfully. (00:01:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.9977 | |
| 2 | V | H | -0.9243 | |
| 3 | Q | H | -0.8032 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.0241 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.6230 | |
| 8 | G | H | -1.3173 | |
| 9 | G | H | -1.2313 | |
| 11 | D | H | -1.6585 | |
| 12 | L | H | 0.0259 | |
| 13 | V | H | -0.8901 | |
| 14 | K | H | -2.1054 | |
| 15 | P | H | -1.8477 | |
| 16 | G | H | -1.4930 | |
| 17 | G | H | -1.0781 | |
| 18 | S | H | -1.0764 | |
| 19 | L | H | -1.0682 | |
| 20 | K | H | -2.0220 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.3795 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.0785 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.7044 | |
| 27 | G | H | -1.1295 | |
| 28 | F | H | -0.4697 | |
| 29 | T | H | -0.2174 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -0.7695 | |
| 36 | S | H | -0.0011 | |
| 37 | Y | H | 0.6137 | |
| 38 | G | H | 0.8135 | |
| 39 | M | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | 0.0000 | |
| 45 | T | H | -2.2181 | |
| 46 | P | H | -2.1441 | |
| 47 | D | H | -3.3040 | |
| 48 | K | H | -3.6168 | |
| 49 | R | H | -3.4578 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.0736 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | T | H | 0.9800 | |
| 56 | I | H | 0.0000 | |
| 57 | S | H | 0.4718 | |
| 58 | S | H | -0.0126 | |
| 59 | G | H | -0.5469 | |
| 62 | G | H | -0.0525 | |
| 63 | S | H | 0.4151 | |
| 64 | Y | H | 1.7505 | |
| 65 | I | H | 2.0099 | |
| 66 | Y | H | 1.6100 | |
| 67 | Y | H | -0.0443 | |
| 68 | P | H | 0.0000 | |
| 69 | D | H | -2.4012 | |
| 70 | S | H | -1.7742 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.4601 | |
| 74 | G | H | -1.7191 | |
| 75 | R | H | -1.5599 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.6452 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.3288 | |
| 80 | R | H | -0.9482 | |
| 81 | D | H | -1.4223 | |
| 82 | N | H | -1.5475 | |
| 83 | A | H | -1.3054 | |
| 84 | K | H | -2.2488 | |
| 85 | N | H | -1.7294 | |
| 86 | T | H | -0.9562 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.5594 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.4218 | |
| 91 | M | H | 0.0000 | |
| 92 | S | H | -1.0403 | |
| 93 | S | H | -1.1381 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -2.3164 | |
| 96 | S | H | -1.9849 | |
| 97 | E | H | -2.3694 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.7405 | |
| 100 | A | H | 0.0000 | |
| 101 | M | H | -0.2062 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | H | H | 0.0000 | |
| 108 | V | H | 1.7866 | |
| 109 | L | H | 2.6548 | |
| 110 | L | H | 2.6963 | |
| 112 | Y | H | 1.9395 | |
| 113 | Y | H | 1.5358 | |
| 114 | N | H | 0.0000 | |
| 115 | M | H | 0.0000 | |
| 116 | D | H | 0.1939 | |
| 117 | Y | H | 0.2698 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.0562 | |
| 121 | G | H | -0.4676 | |
| 122 | T | H | -0.5438 | |
| 123 | S | H | -0.5902 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.6958 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -1.0080 | |
| 128 | S | H | -0.7820 | |
| 1 | D | L | -2.1470 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.3857 | |
| 4 | M | L | 0.0000 | |
| 5 | N | L | -2.2173 | |
| 6 | Q | L | -1.3095 | |
| 7 | S | L | -0.9828 | |
| 8 | P | L | -0.7016 | |
| 9 | S | L | -0.8879 | |
| 10 | S | L | -0.7479 | |
| 11 | L | L | -0.4160 | |
| 12 | S | L | -0.5144 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.4486 | |
| 15 | L | L | 0.2799 | |
| 16 | G | L | -0.3934 | |
| 17 | D | L | -0.6643 | |
| 18 | T | L | -0.5116 | |
| 19 | I | L | 0.0000 | |
| 20 | T | L | -0.1875 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.6853 | |
| 23 | C | L | 0.0000 | |
| 24 | H | L | -2.0704 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.9664 | |
| 27 | Q | L | -2.2014 | |
| 28 | N | L | -1.9290 | |
| 29 | I | L | 0.0000 | |
| 36 | N | L | -1.1752 | |
| 37 | V | L | -0.2325 | |
| 38 | W | L | 0.0770 | |
| 39 | L | L | 0.0000 | |
| 40 | S | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -0.9491 | |
| 44 | Q | L | -1.2445 | |
| 45 | K | L | -1.6141 | |
| 46 | P | L | -0.9998 | |
| 47 | G | L | -1.2495 | |
| 48 | N | L | -1.9480 | |
| 49 | I | L | -1.2455 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.5650 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.0748 | |
| 56 | K | L | -0.3690 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.5914 | |
| 66 | N | L | -0.7670 | |
| 67 | L | L | -0.0809 | |
| 68 | H | L | -0.3345 | |
| 69 | T | L | -0.3038 | |
| 70 | G | L | -0.4120 | |
| 71 | V | L | -0.2590 | |
| 72 | P | L | -0.3208 | |
| 74 | S | L | -0.4009 | |
| 75 | R | L | -0.6138 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.4463 | |
| 78 | G | L | -0.4717 | |
| 79 | S | L | -0.6259 | |
| 80 | G | L | -0.7543 | |
| 83 | S | L | -0.8391 | |
| 84 | G | L | -1.1449 | |
| 85 | T | L | -1.2851 | |
| 86 | G | L | -1.1491 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.4651 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.2660 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -0.6951 | |
| 93 | S | L | -0.5919 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.6707 | |
| 96 | P | L | -0.7455 | |
| 97 | E | L | -1.3380 | |
| 98 | D | L | 0.0000 | |
| 99 | I | L | -0.1308 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.9860 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | G | L | 0.1981 | |
| 108 | Q | L | -0.3061 | |
| 109 | S | L | -0.2258 | |
| 114 | F | L | 0.3187 | |
| 115 | P | L | -0.3860 | |
| 116 | W | L | 0.0000 | |
| 117 | T | L | -0.7360 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -2.1068 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.3424 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -0.4634 | |
| 126 | I | L | -0.2723 | |
| 127 | K | L | -1.3214 |