Project name: 6FOE VHVL

Status: done

Started: 2026-03-30 05:22:33
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Chain sequence(s) H: EVQLLESGGGLVQPGGSLRLSCAASGFTFSIYSMNWVRQAPGKGLEWVSSIGSSGGTTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAGSQWLYGMDVWGQGTTVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRSSQRIMTYLNWYQQKPGKAPKLLIFVASHSQSGVPSRFRGSGSETDFTLTISGLQPEDSATYYCQQSFWTPLTFGGGTKVEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:59)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:00)
Show buried residues

Minimal score value
-2.8653
Maximal score value
1.8056
Average score
-0.5883
Total score value
-132.37

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.5360
2 V H -0.1642
3 Q H -0.5543
4 L H 0.0000
5 L H 0.5235
6 E H 0.0000
7 S H -0.5225
8 G H -0.9011
9 G H -0.3369
11 G H 0.3047
12 L H 1.1918
13 V H -0.0373
14 Q H -1.3552
15 P H -1.6515
16 G H -1.4816
17 G H -1.0334
18 S H -1.1212
19 L H -0.7199
20 R H -1.5989
21 L H 0.0000
22 S H -0.3564
23 C H 0.0000
24 A H -0.2682
25 A H 0.0000
26 S H -0.6886
27 G H -0.7845
28 F H 0.0629
29 T H 0.4594
30 F H 0.0000
35 S H 0.2021
36 I H 1.8056
37 Y H 0.0000
38 S H 0.3718
39 M H 0.0000
40 N H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.8697
45 A H -1.2612
46 P H -1.0039
47 G H -1.4588
48 K H -2.2725
49 G H -1.4159
50 L H 0.0000
51 E H -0.9221
52 W H 0.0000
53 V H 0.0000
54 S H 0.0000
55 S H 0.0000
56 I H 0.0000
57 G H -0.0091
58 S H 0.3147
59 S H -0.2369
62 G H -0.5460
63 G H -0.6804
64 T H -0.3157
65 T H 0.0563
66 Y H 0.1229
67 Y H -0.6668
68 A H -1.5047
69 D H -2.6420
70 S H -1.7769
71 V H 0.0000
72 K H -2.5258
74 G H -1.7101
75 R H -1.5908
76 F H 0.0000
77 T H -0.7100
78 I H 0.0000
79 S H -0.4469
80 R H -0.9692
81 D H -1.4944
82 N H -1.4360
83 S H -1.5772
84 K H -2.3851
85 N H -1.8200
86 T H -1.0328
87 L H 0.0000
88 Y H -0.4285
89 L H 0.0000
90 Q H -1.0334
91 M H 0.0000
92 N H -1.2727
93 S H -1.2521
94 L H 0.0000
95 R H -2.3437
96 A H -1.7347
97 E H -2.2468
98 D H 0.0000
99 T H -0.6610
100 A H 0.0000
101 V H 0.0114
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 G H 0.0000
107 S H 0.0000
108 Q H 0.4298
109 W H 1.5302
110 L H 1.6422
113 Y H 1.3231
114 G H 0.0000
115 M H 0.0000
116 D H -0.6844
117 V H 0.0000
118 W H -0.3056
119 G H 0.0000
120 Q H -1.4217
121 G H -0.7213
122 T H -0.2919
123 T H 0.0701
124 V H 0.0000
125 T H -0.0452
126 V H 0.0000
127 S H -0.5562
128 S H -0.5776
1 D L -2.2381
2 I L 0.0000
3 Q L -2.2127
4 M L 0.0000
5 T L -1.2738
6 Q L 0.0000
7 S L -0.8426
8 P L -0.6583
9 S L -0.9043
10 S L -1.3301
11 L L -1.0733
12 S L -1.5307
13 A L 0.0000
14 S L -0.8268
15 V L 0.2811
16 G L -0.7176
17 D L -1.7390
18 R L -2.3041
19 V L 0.0000
20 T L -0.8124
21 I L 0.0000
22 T L -0.7668
23 C L 0.0000
24 R L -2.8653
25 S L 0.0000
26 S L -2.3155
27 Q L -2.7412
28 R L -2.4955
29 I L 0.0000
36 M L -0.0897
37 T L 0.2118
38 Y L 0.8562
39 L L 0.0000
40 N L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L 0.0000
45 K L -1.9312
46 P L -1.3025
47 G L -1.6932
48 K L -2.5724
49 A L -1.5803
50 P L 0.0000
51 K L -1.3784
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 F L 0.2565
56 V L 0.5294
57 A L 0.0000
65 S L -1.0038
66 H L -1.1577
67 S L -1.1655
68 Q L -0.7990
69 S L -0.7430
70 G L -0.6143
71 V L -0.6654
72 P L -0.6467
74 S L -0.9332
75 R L -1.2357
76 F L 0.0000
77 R L -2.2384
78 G L 0.0000
79 S L -0.9759
80 G L -0.8035
83 S L -0.9400
84 E L -1.5726
85 T L -2.0483
86 D L -2.0194
87 F L 0.0000
88 T L -0.9031
89 L L 0.0000
90 T L -1.2154
91 I L 0.0000
92 S L -1.6335
93 G L -1.1084
94 L L 0.0000
95 Q L -0.7792
96 P L -1.3039
97 E L -1.9318
98 D L 0.0000
99 S L -1.7635
100 A L 0.0000
101 T L -1.3250
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 S L 0.0000
108 F L 1.0953
109 W L 0.9100
114 T L 0.4744
115 P L -0.1841
116 L L 0.1654
117 T L -0.3911
118 F L -0.2648
119 G L 0.0000
120 G L -1.1822
121 G L 0.0000
122 T L 0.0000
123 K L -2.4244
124 V L 0.0000
125 E L -2.4924
126 I L -1.2405
127 K L -1.7017
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Laboratory of Theory of Biopolymers 2018