| Chain sequence(s) |
H: EVQLLESGGGLVQPGGSLRLSCAASGFTFSIYSMNWVRQAPGKGLEWVSSIGSSGGTTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAGSQWLYGMDVWGQGTTVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRSSQRIMTYLNWYQQKPGKAPKLLIFVASHSQSGVPSRFRGSGSETDFTLTISGLQPEDSATYYCQQSFWTPLTFGGGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:59)
[INFO] Main: Simulation completed successfully. (00:01:00)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.5360 | |
| 2 | V | H | -0.1642 | |
| 3 | Q | H | -0.5543 | |
| 4 | L | H | 0.0000 | |
| 5 | L | H | 0.5235 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.5225 | |
| 8 | G | H | -0.9011 | |
| 9 | G | H | -0.3369 | |
| 11 | G | H | 0.3047 | |
| 12 | L | H | 1.1918 | |
| 13 | V | H | -0.0373 | |
| 14 | Q | H | -1.3552 | |
| 15 | P | H | -1.6515 | |
| 16 | G | H | -1.4816 | |
| 17 | G | H | -1.0334 | |
| 18 | S | H | -1.1212 | |
| 19 | L | H | -0.7199 | |
| 20 | R | H | -1.5989 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.3564 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.2682 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.6886 | |
| 27 | G | H | -0.7845 | |
| 28 | F | H | 0.0629 | |
| 29 | T | H | 0.4594 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | 0.2021 | |
| 36 | I | H | 1.8056 | |
| 37 | Y | H | 0.0000 | |
| 38 | S | H | 0.3718 | |
| 39 | M | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.8697 | |
| 45 | A | H | -1.2612 | |
| 46 | P | H | -1.0039 | |
| 47 | G | H | -1.4588 | |
| 48 | K | H | -2.2725 | |
| 49 | G | H | -1.4159 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.9221 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | S | H | 0.0000 | |
| 55 | S | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | G | H | -0.0091 | |
| 58 | S | H | 0.3147 | |
| 59 | S | H | -0.2369 | |
| 62 | G | H | -0.5460 | |
| 63 | G | H | -0.6804 | |
| 64 | T | H | -0.3157 | |
| 65 | T | H | 0.0563 | |
| 66 | Y | H | 0.1229 | |
| 67 | Y | H | -0.6668 | |
| 68 | A | H | -1.5047 | |
| 69 | D | H | -2.6420 | |
| 70 | S | H | -1.7769 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.5258 | |
| 74 | G | H | -1.7101 | |
| 75 | R | H | -1.5908 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.7100 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.4469 | |
| 80 | R | H | -0.9692 | |
| 81 | D | H | -1.4944 | |
| 82 | N | H | -1.4360 | |
| 83 | S | H | -1.5772 | |
| 84 | K | H | -2.3851 | |
| 85 | N | H | -1.8200 | |
| 86 | T | H | -1.0328 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.4285 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.0334 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.2727 | |
| 93 | S | H | -1.2521 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.3437 | |
| 96 | A | H | -1.7347 | |
| 97 | E | H | -2.2468 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.6610 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.0114 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | G | H | 0.0000 | |
| 107 | S | H | 0.0000 | |
| 108 | Q | H | 0.4298 | |
| 109 | W | H | 1.5302 | |
| 110 | L | H | 1.6422 | |
| 113 | Y | H | 1.3231 | |
| 114 | G | H | 0.0000 | |
| 115 | M | H | 0.0000 | |
| 116 | D | H | -0.6844 | |
| 117 | V | H | 0.0000 | |
| 118 | W | H | -0.3056 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.4217 | |
| 121 | G | H | -0.7213 | |
| 122 | T | H | -0.2919 | |
| 123 | T | H | 0.0701 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.0452 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.5562 | |
| 128 | S | H | -0.5776 | |
| 1 | D | L | -2.2381 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.2127 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.2738 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.8426 | |
| 8 | P | L | -0.6583 | |
| 9 | S | L | -0.9043 | |
| 10 | S | L | -1.3301 | |
| 11 | L | L | -1.0733 | |
| 12 | S | L | -1.5307 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.8268 | |
| 15 | V | L | 0.2811 | |
| 16 | G | L | -0.7176 | |
| 17 | D | L | -1.7390 | |
| 18 | R | L | -2.3041 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.8124 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.7668 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.8653 | |
| 25 | S | L | 0.0000 | |
| 26 | S | L | -2.3155 | |
| 27 | Q | L | -2.7412 | |
| 28 | R | L | -2.4955 | |
| 29 | I | L | 0.0000 | |
| 36 | M | L | -0.0897 | |
| 37 | T | L | 0.2118 | |
| 38 | Y | L | 0.8562 | |
| 39 | L | L | 0.0000 | |
| 40 | N | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.9312 | |
| 46 | P | L | -1.3025 | |
| 47 | G | L | -1.6932 | |
| 48 | K | L | -2.5724 | |
| 49 | A | L | -1.5803 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.3784 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | F | L | 0.2565 | |
| 56 | V | L | 0.5294 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -1.0038 | |
| 66 | H | L | -1.1577 | |
| 67 | S | L | -1.1655 | |
| 68 | Q | L | -0.7990 | |
| 69 | S | L | -0.7430 | |
| 70 | G | L | -0.6143 | |
| 71 | V | L | -0.6654 | |
| 72 | P | L | -0.6467 | |
| 74 | S | L | -0.9332 | |
| 75 | R | L | -1.2357 | |
| 76 | F | L | 0.0000 | |
| 77 | R | L | -2.2384 | |
| 78 | G | L | 0.0000 | |
| 79 | S | L | -0.9759 | |
| 80 | G | L | -0.8035 | |
| 83 | S | L | -0.9400 | |
| 84 | E | L | -1.5726 | |
| 85 | T | L | -2.0483 | |
| 86 | D | L | -2.0194 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.9031 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -1.2154 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.6335 | |
| 93 | G | L | -1.1084 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.7792 | |
| 96 | P | L | -1.3039 | |
| 97 | E | L | -1.9318 | |
| 98 | D | L | 0.0000 | |
| 99 | S | L | -1.7635 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -1.3250 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | S | L | 0.0000 | |
| 108 | F | L | 1.0953 | |
| 109 | W | L | 0.9100 | |
| 114 | T | L | 0.4744 | |
| 115 | P | L | -0.1841 | |
| 116 | L | L | 0.1654 | |
| 117 | T | L | -0.3911 | |
| 118 | F | L | -0.2648 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -1.1822 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -2.4244 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -2.4924 | |
| 126 | I | L | -1.2405 | |
| 127 | K | L | -1.7017 |