| Chain sequence(s) |
B: KKEEIEKKKKEIAKLKAEAEEAKEKAKNSALPLKVELDLKAKELEKKAKELEEEL
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:18)
[INFO] Main: Simulation completed successfully. (00:03:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | B | -3.9595 | |
| 2 | K | B | -4.4194 | |
| 3 | E | B | -5.0465 | |
| 4 | E | B | -5.0070 | |
| 5 | I | B | -4.0511 | |
| 6 | E | B | -4.9973 | |
| 7 | K | B | -5.4740 | |
| 8 | K | B | -4.8150 | |
| 9 | K | B | -4.7287 | |
| 10 | K | B | -4.8849 | |
| 11 | E | B | -4.5656 | |
| 12 | I | B | 0.0000 | |
| 13 | A | B | -3.0100 | |
| 14 | K | B | -3.4732 | |
| 15 | L | B | -3.2843 | |
| 16 | K | B | -3.1014 | |
| 17 | A | B | -2.6158 | |
| 18 | E | B | -3.0841 | |
| 19 | A | B | 0.0000 | |
| 20 | E | B | -4.5582 | |
| 21 | E | B | -4.4596 | |
| 22 | A | B | 0.0000 | |
| 23 | K | B | -4.4821 | |
| 24 | E | B | -5.0642 | |
| 25 | K | B | -4.2466 | |
| 26 | A | B | 0.0000 | |
| 27 | K | B | -3.5153 | |
| 28 | N | B | -2.8498 | |
| 29 | S | B | -1.1614 | |
| 30 | A | B | 0.4062 | |
| 31 | L | B | 1.3519 | |
| 32 | P | B | 0.8127 | |
| 33 | L | B | 0.6372 | |
| 34 | K | B | -0.6336 | |
| 35 | V | B | 0.6492 | |
| 36 | E | B | -0.9710 | |
| 37 | L | B | -1.9690 | |
| 38 | D | B | -2.1822 | |
| 39 | L | B | -0.8412 | |
| 40 | K | B | -2.6907 | |
| 41 | A | B | 0.0000 | |
| 42 | K | B | -3.8829 | |
| 43 | E | B | -3.8419 | |
| 44 | L | B | -3.6870 | |
| 45 | E | B | -3.9507 | |
| 46 | K | B | -4.7157 | |
| 47 | K | B | -4.2611 | |
| 48 | A | B | 0.0000 | |
| 49 | K | B | -4.6080 | |
| 50 | E | B | -4.6015 | |
| 51 | L | B | -3.9993 | |
| 52 | E | B | -4.6842 | |
| 53 | E | B | -4.2106 | |
| 54 | E | B | -3.3634 | |
| 55 | L | B | -1.9516 |