| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVRDGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEPQHCTADDRVNFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRCGPEGHPLPDAPPPSPLYVPPPPTSPYWVRPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPLPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9465 | |
| 2 | L | A | 1.9680 | |
| 3 | P | A | 0.8335 | |
| 4 | P | A | 0.3827 | |
| 5 | T | A | 0.1300 | |
| 6 | T | A | 0.1402 | |
| 7 | P | A | 0.2001 | |
| 8 | V | A | 1.2051 | |
| 9 | A | A | 0.0857 | |
| 10 | K | A | -1.0273 | |
| 11 | V | A | -0.1848 | |
| 12 | Q | A | -1.4220 | |
| 13 | S | A | -1.5696 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4453 | |
| 16 | E | A | -2.4524 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4526 | |
| 20 | P | A | 0.1262 | |
| 21 | T | A | 0.1633 | |
| 22 | S | A | -0.0907 | |
| 23 | L | A | 0.1073 | |
| 24 | F | A | -0.0144 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2095 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8471 | |
| 31 | R | A | -2.6839 | |
| 32 | L | A | -0.7953 | |
| 33 | L | A | 1.1654 | |
| 34 | T | A | 1.3731 | |
| 35 | V | A | 1.8370 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2232 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6249 | |
| 40 | K | A | -1.6368 | |
| 41 | D | A | -0.9498 | |
| 42 | I | A | 0.7668 | |
| 43 | V | A | 0.7954 | |
| 44 | R | A | -1.5827 | |
| 45 | D | A | -2.5205 | |
| 46 | G | A | -1.5429 | |
| 47 | K | A | -1.1932 | |
| 48 | V | A | 1.2898 | |
| 49 | V | A | 1.8980 | |
| 50 | V | A | 1.2119 | |
| 51 | P | A | 0.4292 | |
| 52 | K | A | -0.6440 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1587 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4079 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2349 | |
| 70 | K | A | -1.7846 | |
| 71 | F | A | -0.6311 | |
| 72 | A | A | -0.5767 | |
| 73 | L | A | -0.8642 | |
| 74 | P | A | -1.2005 | |
| 75 | Q | A | -2.5022 | |
| 76 | K | A | -3.1041 | |
| 77 | D | A | -2.9848 | |
| 78 | F | A | -1.6598 | |
| 79 | Y | A | -1.8761 | |
| 80 | D | A | -2.6736 | |
| 81 | P | A | -2.3042 | |
| 82 | E | A | -3.0477 | |
| 83 | K | A | -3.3890 | |
| 84 | E | A | -2.4523 | |
| 85 | R | A | -1.2899 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6445 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9749 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3546 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6937 | |
| 99 | G | A | -0.5387 | |
| 100 | P | A | -0.4074 | |
| 101 | L | A | 0.0377 | |
| 102 | G | A | -0.1924 | |
| 103 | K | A | -0.5732 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4169 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.0986 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.1577 | |
| 110 | L | A | -0.1029 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.2401 | |
| 113 | K | A | -0.5012 | |
| 114 | L | A | -0.6772 | |
| 115 | G | A | -0.9815 | |
| 116 | D | A | -1.3269 | |
| 117 | T | A | -1.0615 | |
| 118 | E | A | -1.6738 | |
| 119 | N | A | -2.1908 | |
| 120 | P | A | -1.9719 | |
| 121 | T | A | -1.6442 | |
| 122 | E | A | -2.3510 | |
| 123 | P | A | -1.0185 | |
| 124 | Q | A | -0.7694 | |
| 125 | H | A | -0.3813 | |
| 126 | C | A | -0.4240 | |
| 127 | T | A | -0.7576 | |
| 128 | A | A | -0.9527 | |
| 129 | D | A | -1.9965 | |
| 130 | D | A | -1.4397 | |
| 131 | R | A | -1.3133 | |
| 132 | V | A | -0.4467 | |
| 133 | N | A | -0.8977 | |
| 134 | F | A | -0.3866 | |
| 135 | S | A | -0.3606 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.6255 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5639 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1898 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1642 | |
| 157 | D | A | 0.3391 | |
| 158 | L | A | 0.8031 | |
| 159 | A | A | 0.1719 | |
| 160 | E | A | -1.4552 | |
| 161 | P | A | -0.2125 | |
| 162 | C | A | 0.1853 | |
| 163 | P | A | -0.1719 | |
| 164 | G | A | -0.0800 | |
| 165 | L | A | 0.5832 | |
| 166 | P | A | -0.1204 | |
| 167 | P | A | -0.3430 | |
| 168 | G | A | -0.4539 | |
| 169 | A | A | -0.0308 | |
| 170 | C | A | 0.6515 | |
| 171 | P | A | 0.5303 | |
| 172 | P | A | 0.8533 | |
| 173 | I | A | 2.0174 | |
| 174 | Q | A | 0.8658 | |
| 175 | L | A | 1.5060 | |
| 176 | V | A | 0.8729 | |
| 177 | N | A | -0.2814 | |
| 178 | S | A | 0.0370 | |
| 179 | V | A | 0.4299 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3845 | |
| 182 | D | A | 0.0815 | |
| 183 | G | A | -0.1570 | |
| 184 | D | A | -0.5350 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1258 | |
| 190 | F | A | 0.0695 | |
| 191 | G | A | -0.0974 | |
| 192 | N | A | -0.2567 | |
| 193 | M | A | -0.1055 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3875 | |
| 197 | E | A | -2.5743 | |
| 198 | L | A | -1.2144 | |
| 199 | Q | A | -2.5533 | |
| 200 | Q | A | -3.3270 | |
| 201 | D | A | -3.5872 | |
| 202 | R | A | -3.3257 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2283 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3365 | |
| 211 | S | A | -1.8658 | |
| 212 | T | A | -1.4140 | |
| 213 | R | A | -2.0641 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1592 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3731 | |
| 220 | L | A | 0.6041 | |
| 221 | K | A | -1.1140 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8205 | |
| 224 | N | A | -1.4957 | |
| 225 | E | A | -1.2357 | |
| 226 | A | A | -0.6060 | |
| 227 | Y | A | -0.3670 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6758 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0751 | |
| 234 | F | A | 0.2558 | |
| 235 | G | A | -0.8083 | |
| 236 | R | A | -2.5779 | |
| 237 | R | A | -2.8080 | |
| 238 | E | A | -2.0875 | |
| 239 | Q | A | -0.1443 | |
| 240 | V | A | 1.4384 | |
| 241 | Y | A | 1.0838 | |
| 242 | A | A | 0.1397 | |
| 243 | R | A | -1.0119 | |
| 244 | H | A | -0.9983 | |
| 245 | F | A | 0.0617 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.5784 | |
| 249 | C | A | -0.8066 | |
| 250 | G | A | -0.8387 | |
| 251 | P | A | -0.9643 | |
| 252 | E | A | -1.3850 | |
| 253 | G | A | -1.3020 | |
| 254 | H | A | -1.4879 | |
| 255 | P | A | -1.3784 | |
| 256 | L | A | -0.3658 | |
| 257 | P | A | -0.8625 | |
| 258 | D | A | -1.7289 | |
| 259 | A | A | -0.5618 | |
| 260 | P | A | -0.6677 | |
| 261 | P | A | -0.1858 | |
| 262 | P | A | 0.0608 | |
| 263 | S | A | 0.2799 | |
| 264 | P | A | 0.6853 | |
| 265 | L | A | 1.6769 | |
| 266 | Y | A | 1.4968 | |
| 267 | V | A | 1.9221 | |
| 268 | P | A | 0.7832 | |
| 269 | P | A | 0.8415 | |
| 270 | P | A | 0.1234 | |
| 271 | P | A | 0.2568 | |
| 272 | T | A | 0.2294 | |
| 273 | S | A | 0.5764 | |
| 274 | P | A | 0.4853 | |
| 275 | Y | A | 1.6287 | |
| 276 | W | A | 1.9731 | |
| 277 | V | A | 2.1108 | |
| 278 | R | A | 0.6922 | |
| 279 | P | A | -0.0405 | |
| 280 | P | A | 0.0000 | |
| 281 | T | A | -0.5677 | |
| 282 | D | A | -1.1256 | |
| 283 | Y | A | 0.7648 | |
| 284 | F | A | 0.6462 | |
| 285 | G | A | 0.2117 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9156 | |
| 291 | L | A | 1.6280 | |
| 292 | V | A | 0.6391 | |
| 293 | S | A | -0.1660 | |
| 294 | S | A | -0.9640 | |
| 295 | D | A | -1.8419 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.0930 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6506 | |
| 301 | R | A | -1.8723 | |
| 302 | P | A | -0.9900 | |
| 303 | F | A | -0.1955 | |
| 304 | W | A | -0.5636 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0817 | |
| 307 | R | A | -2.8394 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2781 | |
| 310 | G | A | -1.2347 | |
| 311 | N | A | -1.2860 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8662 | |
| 319 | N | A | -0.9629 | |
| 320 | E | A | -1.0517 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3280 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0481 | |
| 333 | N | A | 0.5831 | |
| 334 | F | A | 1.7608 | |
| 335 | T | A | 0.8635 | |
| 336 | I | A | 0.4346 | |
| 337 | S | A | -0.9480 | |
| 338 | Q | A | -1.7216 | |
| 339 | Q | A | -1.1549 | |
| 340 | L | A | 0.6989 | |
| 341 | C | A | 0.5606 | |
| 342 | T | A | 0.3793 | |
| 343 | P | A | 0.1476 | |
| 344 | L | A | 1.0317 | |
| 345 | P | A | 0.5303 | |
| 346 | N | A | -0.0400 | |
| 347 | V | A | 1.6967 | |
| 348 | Y | A | 1.5990 | |
| 349 | D | A | 0.2445 | |
| 350 | P | A | -0.3668 | |
| 351 | S | A | -0.3207 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.6881 | |
| 354 | K | A | -1.8102 | |
| 355 | N | A | -1.7726 | |
| 356 | Y | A | -0.0968 | |
| 357 | L | A | 0.6388 | |
| 358 | R | A | 0.9715 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3952 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0730 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0419 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.7089 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2718 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3066 | |
| 376 | L | A | -1.7030 | |
| 377 | D | A | -1.9785 | |
| 378 | P | A | -1.0304 | |
| 379 | G | A | -1.0081 | |
| 380 | V | A | -0.9278 | |
| 381 | L | A | -0.5248 | |
| 382 | A | A | -0.6542 | |
| 383 | H | A | -0.8104 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4157 | |
| 386 | T | A | -0.5564 | |
| 387 | M | A | -0.3039 | |
| 388 | N | A | -0.8718 | |
| 389 | P | A | -1.2604 | |
| 390 | T | A | -1.4959 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4968 | |
| 393 | E | A | -2.8592 | |
| 394 | N | A | -2.3474 | |
| 395 | W | A | -1.4614 | |
| 396 | N | A | -1.2373 | |
| 397 | L | A | -0.2665 | |
| 398 | G | A | 0.4617 | |
| 399 | F | A | 2.3992 | |
| 400 | V | A | 1.8228 | |
| 401 | P | A | 0.0305 | |
| 402 | P | A | -1.9240 | |
| 403 | K | A | -3.2801 | |
| 404 | E | A | -3.8599 | |
| 405 | R | A | -4.0879 | |
| 406 | E | A | -3.8714 | |
| 407 | D | A | -2.9109 | |
| 408 | P | A | -1.7892 | |
| 409 | Y | A | -0.9855 | |
| 410 | K | A | -2.1221 | |
| 411 | G | A | -0.6376 | |
| 412 | L | A | 0.6729 | |
| 413 | I | A | 1.5858 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3930 | |
| 416 | E | A | -1.6944 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8651 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8823 | |
| 421 | E | A | -2.4982 | |
| 422 | R | A | -2.0705 | |
| 423 | F | A | -1.0000 | |
| 424 | S | A | -1.3168 | |
| 425 | Q | A | -1.7736 | |
| 426 | D | A | -2.9551 | |
| 427 | L | A | -2.1490 | |
| 428 | D | A | -3.0084 | |
| 429 | Q | A | -2.7482 | |
| 430 | F | A | -1.6158 | |
| 431 | A | A | -1.1234 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.2238 | |
| 435 | K | A | -1.0490 | |
| 436 | F | A | -0.0768 | |
| 437 | L | A | 0.8114 | |
| 438 | Y | A | 0.6475 | |
| 439 | Q | A | -0.3744 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine