Project name: 9c81d816c376043

Status: done

Started: 2026-05-21 14:36:34
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Chain sequence(s) A: FFGHKGG
C: FFGHKGG
B: FFGHKGG
E: FFGHKGG
D: FFGHKGG
G: FFGHKGG
F: FFGHKGG
I: FFGHKGG
H: FFGHKGG
K: FFGHKGG
J: FFGHKGG
L: FFGHKGG
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:06)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:09)
Show buried residues

Minimal score value
-2.9452
Maximal score value
2.8767
Average score
-0.2578
Total score value
-21.6573

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 F A 0.0000
2 F A 2.2253
3 G A 0.4379
4 H A 0.0000
5 K A -2.9452
6 G A -2.2214
7 G A -1.3427
1 F B 2.4688
2 F B 2.8599
3 G B 0.5260
4 H B -0.7919
5 K B -2.7597
6 G B -1.9753
7 G B -1.4355
1 F C 0.9948
2 F C 2.2255
3 G C 0.4162
4 H C -0.6626
5 K C -2.2767
6 G C -0.8172
7 G C -0.0191
1 F D 0.0000
2 F D 2.3467
3 G D 0.4962
4 H D 0.0000
5 K D -2.6661
6 G D -1.6590
7 G D -0.9750
1 F E 0.0000
2 F E 1.9443
3 G E 0.4139
4 H E 0.0000
5 K E -2.3494
6 G E -1.8480
7 G E -1.2296
1 F F 0.0000
2 F F 2.4328
3 G F 0.5599
4 H F 0.0000
5 K F -2.6464
6 G F 0.0000
7 G F -1.2329
1 F G 2.3103
2 F G 2.8226
3 G G 0.4305
4 H G -0.5194
5 K G -2.4040
6 G G -1.6489
7 G G -0.4409
1 F H 2.6492
2 F H 2.8767
3 G H 0.5940
4 H H -0.3583
5 K H -2.3179
6 G H -1.7410
7 G H -0.9594
1 F I 0.0000
2 F I 2.4604
3 G I 0.6851
4 H I 0.0000
5 K I -2.2892
6 G I -1.7765
7 G I -1.1676
1 F J 0.0000
2 F J 1.8894
3 G J 0.4044
4 H J 0.0000
5 K J -2.3865
6 G J 0.0000
7 G J -1.1973
1 F K 0.0000
2 F K 1.7587
3 G K 0.3971
4 H K 0.0000
5 K K -2.5458
6 G K -2.0778
7 G K -1.4427
1 F L 0.0000
2 F L 1.7834
3 G L 0.1797
4 H L 0.0000
5 K L -2.6273
6 G L -2.1265
7 G L -1.3663
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Laboratory of Theory of Biopolymers 2018