| Chain sequence(s) |
A: MSTQYTYQQIAEDFRLWSEYVDTAGEMSKDEFNSLSTEDKVRLQVEAFGEEKSPKFSTKVTTKPDFDGFQFYIEAGRDFDGDAYTEAYGVAVPTNIAARIQAQAAELNAGEWLLVEHEA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:00)
[INFO] Main: Simulation completed successfully. (00:00:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5774 | |
| 2 | S | A | 0.0134 | |
| 3 | T | A | 0.0835 | |
| 4 | Q | A | -0.1456 | |
| 5 | Y | A | -0.5455 | |
| 6 | T | A | -0.9429 | |
| 7 | Y | A | -0.3968 | |
| 8 | Q | A | -1.7612 | |
| 9 | Q | A | -1.8888 | |
| 10 | I | A | 0.0000 | |
| 11 | A | A | -1.3828 | |
| 12 | E | A | -2.5060 | |
| 13 | D | A | -1.7805 | |
| 14 | F | A | -0.6237 | |
| 15 | R | A | -1.9680 | |
| 16 | L | A | -1.0465 | |
| 17 | W | A | 0.0000 | |
| 18 | S | A | -1.2345 | |
| 19 | E | A | -1.4846 | |
| 20 | Y | A | 0.0534 | |
| 21 | V | A | 0.3278 | |
| 22 | D | A | -0.8526 | |
| 23 | T | A | -0.7445 | |
| 24 | A | A | -0.8321 | |
| 25 | G | A | -1.3399 | |
| 26 | E | A | -2.4905 | |
| 27 | M | A | -1.6724 | |
| 28 | S | A | -2.0186 | |
| 29 | K | A | -3.2236 | |
| 30 | D | A | -3.4142 | |
| 31 | E | A | -2.5984 | |
| 32 | F | A | 0.0000 | |
| 33 | N | A | -2.3698 | |
| 34 | S | A | -1.3520 | |
| 35 | L | A | -0.5586 | |
| 36 | S | A | -1.1257 | |
| 37 | T | A | -1.4795 | |
| 38 | E | A | -2.1310 | |
| 39 | D | A | -1.5249 | |
| 40 | K | A | -0.6652 | |
| 41 | V | A | -0.7789 | |
| 42 | R | A | -1.9127 | |
| 43 | L | A | 0.1043 | |
| 44 | Q | A | 0.3229 | |
| 45 | V | A | -0.7039 | |
| 46 | E | A | -1.3932 | |
| 47 | A | A | -0.0240 | |
| 48 | F | A | 0.8324 | |
| 49 | G | A | -1.2180 | |
| 50 | E | A | -3.0563 | |
| 51 | E | A | -3.5714 | |
| 52 | K | A | -3.3542 | |
| 53 | S | A | -2.2648 | |
| 54 | P | A | -2.2078 | |
| 55 | K | A | -2.1101 | |
| 56 | F | A | -0.6511 | |
| 57 | S | A | -0.5941 | |
| 58 | T | A | 0.0000 | |
| 59 | K | A | 0.0373 | |
| 60 | V | A | 0.5822 | |
| 61 | T | A | -0.1056 | |
| 62 | T | A | -1.1338 | |
| 63 | K | A | -2.1972 | |
| 64 | P | A | -1.4398 | |
| 65 | D | A | -1.5313 | |
| 66 | F | A | 0.3933 | |
| 67 | D | A | -0.3175 | |
| 68 | G | A | 0.0690 | |
| 69 | F | A | 1.1396 | |
| 70 | Q | A | -0.3145 | |
| 71 | F | A | 0.3496 | |
| 72 | Y | A | -0.2568 | |
| 73 | I | A | 0.0000 | |
| 74 | E | A | -2.6677 | |
| 75 | A | A | -2.3828 | |
| 76 | G | A | -2.5329 | |
| 77 | R | A | -3.0508 | |
| 78 | D | A | -3.3553 | |
| 79 | F | A | 0.0000 | |
| 80 | D | A | -2.9458 | |
| 81 | G | A | -2.0082 | |
| 82 | D | A | -2.7461 | |
| 83 | A | A | -1.9903 | |
| 84 | Y | A | 0.0000 | |
| 85 | T | A | -1.3997 | |
| 86 | E | A | -2.1848 | |
| 87 | A | A | -0.8444 | |
| 88 | Y | A | -0.2953 | |
| 89 | G | A | -0.6893 | |
| 90 | V | A | 0.2713 | |
| 91 | A | A | -0.0199 | |
| 92 | V | A | 0.0688 | |
| 93 | P | A | -0.3203 | |
| 94 | T | A | -0.9798 | |
| 95 | N | A | -1.5152 | |
| 96 | I | A | -0.6664 | |
| 97 | A | A | -1.5109 | |
| 98 | A | A | -1.7562 | |
| 99 | R | A | -2.1829 | |
| 100 | I | A | 0.0000 | |
| 101 | Q | A | -2.6457 | |
| 102 | A | A | -1.7635 | |
| 103 | Q | A | -2.0961 | |
| 104 | A | A | 0.0000 | |
| 105 | A | A | -1.9848 | |
| 106 | E | A | -2.3114 | |
| 107 | L | A | -2.0667 | |
| 108 | N | A | -1.9972 | |
| 109 | A | A | -1.6272 | |
| 110 | G | A | -1.5208 | |
| 111 | E | A | -1.4569 | |
| 112 | W | A | -0.8588 | |
| 113 | L | A | 0.0000 | |
| 114 | L | A | 0.1947 | |
| 115 | V | A | 0.0000 | |
| 116 | E | A | -1.8630 | |
| 117 | H | A | -2.4667 | |
| 118 | E | A | -2.4902 | |
| 119 | A | A | -1.1503 |