| Chain sequence(s) |
L: KTAGQAAGGD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:05)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 725 | K | L | -2.0370 | |
| 726 | T | L | -0.3678 | |
| 727 | A | L | 0.0456 | |
| 728 | G | L | 0.0000 | |
| 729 | Q | L | -1.1877 | |
| 730 | A | L | -0.1482 | |
| 731 | A | L | -0.0156 | |
| 732 | G | L | -0.5426 | |
| 733 | G | L | -0.8835 | |
| 734 | D | L | -2.1835 |