| Chain sequence(s) |
B: ALMDEIMKMTAEIKAKMGAAYAALQAGDVAAAEAAAAEAKALMEKLAAMG
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:57)
[INFO] Main: Simulation completed successfully. (00:00:57)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | B | 0.4329 | |
| 2 | L | B | 1.0308 | |
| 3 | M | B | 0.8788 | |
| 4 | D | B | -0.9046 | |
| 5 | E | B | -0.8209 | |
| 6 | I | B | 0.0634 | |
| 7 | M | B | -0.2174 | |
| 8 | K | B | -2.1156 | |
| 9 | M | B | 0.0000 | |
| 10 | T | B | -1.1630 | |
| 11 | A | B | -1.6668 | |
| 12 | E | B | -2.4088 | |
| 13 | I | B | 0.0000 | |
| 14 | K | B | -2.4333 | |
| 15 | A | B | -1.3903 | |
| 16 | K | B | -1.5498 | |
| 17 | M | B | -1.1389 | |
| 18 | G | B | -0.2524 | |
| 19 | A | B | -0.0478 | |
| 20 | A | B | 0.0000 | |
| 21 | Y | B | 1.3351 | |
| 22 | A | B | 0.6456 | |
| 23 | A | B | 0.4713 | |
| 24 | L | B | 1.2124 | |
| 25 | Q | B | -0.2097 | |
| 26 | A | B | -0.1692 | |
| 27 | G | B | -0.1851 | |
| 28 | D | B | -0.3978 | |
| 29 | V | B | 1.0550 | |
| 30 | A | B | 0.0865 | |
| 31 | A | B | 0.0612 | |
| 32 | A | B | 0.0000 | |
| 33 | E | B | -1.2229 | |
| 34 | A | B | -1.0871 | |
| 35 | A | B | 0.0000 | |
| 36 | A | B | -1.3538 | |
| 37 | A | B | -1.6178 | |
| 38 | E | B | -2.3848 | |
| 39 | A | B | 0.0000 | |
| 40 | K | B | -2.5347 | |
| 41 | A | B | -1.9473 | |
| 42 | L | B | -1.6781 | |
| 43 | M | B | -1.5192 | |
| 44 | E | B | -2.6204 | |
| 45 | K | B | -2.0540 | |
| 46 | L | B | -0.7850 | |
| 47 | A | B | -0.7358 | |
| 48 | A | B | -0.7725 | |
| 49 | M | B | -0.1981 | |
| 50 | G | B | -0.2064 |