| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFADIVKDGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGRGTVGHPLFNKLGDTENPTTPQHDTADVRVAFSWDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPDGHPLPADPPPSPLYVPPPPDSPYAVPPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLATPEPNVYDPSYFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9484 | |
| 2 | L | A | 1.9719 | |
| 3 | P | A | 0.6503 | |
| 4 | P | A | 0.3673 | |
| 5 | T | A | 0.1169 | |
| 6 | T | A | 0.1295 | |
| 7 | P | A | 0.1675 | |
| 8 | V | A | 1.2125 | |
| 9 | A | A | 0.0328 | |
| 10 | K | A | -1.1388 | |
| 11 | V | A | -0.3750 | |
| 12 | Q | A | -1.5161 | |
| 13 | S | A | -1.6114 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4628 | |
| 16 | E | A | -2.4595 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4463 | |
| 20 | P | A | 0.0989 | |
| 21 | T | A | 0.1149 | |
| 22 | S | A | -0.1701 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1048 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1827 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7845 | |
| 31 | R | A | -2.6324 | |
| 32 | L | A | -0.7626 | |
| 33 | L | A | 1.2124 | |
| 34 | T | A | 1.4447 | |
| 35 | V | A | 1.9657 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | 0.2742 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | 0.2277 | |
| 40 | A | A | 0.1000 | |
| 41 | D | A | -0.0682 | |
| 42 | I | A | 1.4957 | |
| 43 | V | A | 1.2229 | |
| 44 | K | A | -1.3802 | |
| 45 | D | A | -2.4406 | |
| 46 | G | A | -1.4467 | |
| 47 | K | A | -1.0629 | |
| 48 | V | A | 1.6418 | |
| 49 | V | A | 2.0485 | |
| 50 | V | A | 1.5903 | |
| 51 | P | A | 0.8094 | |
| 52 | K | A | 0.0104 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1464 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4559 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3001 | |
| 70 | K | A | -1.8131 | |
| 71 | F | A | -0.6675 | |
| 72 | A | A | -0.5802 | |
| 73 | L | A | -0.8695 | |
| 74 | P | A | -1.2636 | |
| 75 | Q | A | -2.4773 | |
| 76 | K | A | -3.0935 | |
| 77 | D | A | -2.9879 | |
| 78 | F | A | -1.6466 | |
| 79 | Y | A | -1.9189 | |
| 80 | D | A | -2.7500 | |
| 81 | P | A | -2.3436 | |
| 82 | E | A | -3.0645 | |
| 83 | K | A | -3.4353 | |
| 84 | E | A | -2.4959 | |
| 85 | R | A | -1.3094 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6204 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9433 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3052 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7343 | |
| 99 | G | A | -0.5350 | |
| 100 | P | A | -0.4802 | |
| 101 | L | A | -0.1090 | |
| 102 | G | A | -0.5665 | |
| 103 | R | A | -1.2979 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.5149 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1821 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4374 | |
| 110 | L | A | 0.4111 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0105 | |
| 113 | K | A | -0.4927 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.3152 | |
| 117 | T | A | -1.2237 | |
| 118 | E | A | -2.4681 | |
| 119 | N | A | -2.3701 | |
| 120 | P | A | -1.6703 | |
| 121 | T | A | -0.9567 | |
| 122 | T | A | -0.7338 | |
| 123 | P | A | -0.5881 | |
| 124 | Q | A | -1.2904 | |
| 125 | H | A | -1.6279 | |
| 126 | D | A | -2.3657 | |
| 127 | T | A | -1.6165 | |
| 128 | A | A | -1.3115 | |
| 129 | D | A | -2.0388 | |
| 130 | V | A | -1.3934 | |
| 131 | R | A | -0.8309 | |
| 132 | V | A | 0.3713 | |
| 133 | A | A | 0.4563 | |
| 134 | F | A | 0.3041 | |
| 135 | S | A | -0.0216 | |
| 136 | W | A | 0.0000 | |
| 137 | D | A | 0.0000 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5613 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2429 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1388 | |
| 157 | D | A | 0.3067 | |
| 158 | L | A | 0.7896 | |
| 159 | A | A | 0.1591 | |
| 160 | E | A | -1.4470 | |
| 161 | P | A | -0.2051 | |
| 162 | C | A | 0.1958 | |
| 163 | P | A | -0.1581 | |
| 164 | G | A | -0.0645 | |
| 165 | L | A | 0.6099 | |
| 166 | P | A | -0.1068 | |
| 167 | P | A | -0.3364 | |
| 168 | G | A | -0.4145 | |
| 169 | A | A | -0.0130 | |
| 170 | C | A | 0.6661 | |
| 171 | P | A | 0.5228 | |
| 172 | P | A | 0.7706 | |
| 173 | I | A | 1.9602 | |
| 174 | Q | A | 0.8193 | |
| 175 | L | A | 1.4646 | |
| 176 | V | A | 0.8309 | |
| 177 | N | A | -0.3541 | |
| 178 | S | A | 0.0076 | |
| 179 | V | A | 0.3978 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3716 | |
| 182 | D | A | 0.0685 | |
| 183 | G | A | -0.1619 | |
| 184 | D | A | -0.5684 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | -0.4743 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1292 | |
| 190 | F | A | 0.0266 | |
| 191 | G | A | -0.1529 | |
| 192 | N | A | -0.3225 | |
| 193 | M | A | -0.1595 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4211 | |
| 197 | E | A | -2.6466 | |
| 198 | L | A | -1.2425 | |
| 199 | Q | A | -2.5535 | |
| 200 | Q | A | -3.3378 | |
| 201 | D | A | -3.6013 | |
| 202 | R | A | -3.3418 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.4746 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3759 | |
| 211 | S | A | -1.7107 | |
| 212 | T | A | -1.4561 | |
| 213 | R | A | -2.1281 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.2148 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3059 | |
| 220 | L | A | 0.4840 | |
| 221 | K | A | -1.3456 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8967 | |
| 224 | N | A | -1.5811 | |
| 225 | E | A | -1.3193 | |
| 226 | A | A | -0.6546 | |
| 227 | Y | A | -0.3951 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7105 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.1007 | |
| 234 | F | A | 0.2965 | |
| 235 | G | A | -0.7654 | |
| 236 | R | A | -2.5253 | |
| 237 | R | A | -2.7171 | |
| 238 | E | A | -2.0227 | |
| 239 | Q | A | -0.0800 | |
| 240 | V | A | 1.5543 | |
| 241 | Y | A | 1.2691 | |
| 242 | A | A | 0.1904 | |
| 243 | R | A | -1.0686 | |
| 244 | H | A | -1.1141 | |
| 245 | F | A | -0.1409 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.7715 | |
| 249 | A | A | -1.3595 | |
| 250 | G | A | -1.2267 | |
| 251 | P | A | -1.1582 | |
| 252 | D | A | -1.3605 | |
| 253 | G | A | -1.2704 | |
| 254 | H | A | -1.4357 | |
| 255 | P | A | -0.9221 | |
| 256 | L | A | 0.2094 | |
| 257 | P | A | -0.0911 | |
| 258 | A | A | -0.2193 | |
| 259 | D | A | -0.6178 | |
| 260 | P | A | -0.6912 | |
| 261 | P | A | -0.1873 | |
| 262 | P | A | -0.0746 | |
| 263 | S | A | 0.2952 | |
| 264 | P | A | 0.5675 | |
| 265 | L | A | 1.8199 | |
| 266 | Y | A | 1.7348 | |
| 267 | V | A | 1.8530 | |
| 268 | P | A | 1.0163 | |
| 269 | P | A | 0.4015 | |
| 270 | P | A | -0.6311 | |
| 271 | P | A | -0.8843 | |
| 272 | D | A | -1.8850 | |
| 273 | S | A | -0.5528 | |
| 274 | P | A | -0.1039 | |
| 275 | Y | A | 1.0319 | |
| 276 | A | A | 0.7263 | |
| 277 | V | A | 1.8984 | |
| 278 | P | A | 1.0103 | |
| 279 | P | A | -0.2537 | |
| 280 | P | A | -0.7355 | |
| 281 | T | A | -0.5093 | |
| 282 | D | A | -0.9474 | |
| 283 | Y | A | 0.8858 | |
| 284 | F | A | 0.7061 | |
| 285 | G | A | 0.1451 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9219 | |
| 291 | L | A | 1.5460 | |
| 292 | V | A | 0.5178 | |
| 293 | S | A | -0.1549 | |
| 294 | S | A | -0.9635 | |
| 295 | D | A | -1.8412 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.0695 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6028 | |
| 301 | R | A | -1.8052 | |
| 302 | P | A | -0.9106 | |
| 303 | F | A | -0.0955 | |
| 304 | W | A | -0.4809 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0725 | |
| 307 | R | A | -2.8365 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2564 | |
| 310 | G | A | -1.2252 | |
| 311 | N | A | -1.3146 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8734 | |
| 319 | N | A | -0.8847 | |
| 320 | E | A | -1.0464 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.5139 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.3891 | |
| 333 | N | A | 0.3170 | |
| 334 | F | A | 1.4689 | |
| 335 | T | A | 0.7477 | |
| 336 | I | A | 0.3842 | |
| 337 | S | A | -0.9878 | |
| 338 | Q | A | -1.7619 | |
| 339 | Q | A | -1.3431 | |
| 340 | L | A | 0.5920 | |
| 341 | A | A | 0.1968 | |
| 342 | T | A | -0.3681 | |
| 343 | P | A | -0.5546 | |
| 344 | E | A | -1.6565 | |
| 345 | P | A | -1.0804 | |
| 346 | N | A | -0.7559 | |
| 347 | V | A | 1.0209 | |
| 348 | Y | A | 1.2945 | |
| 349 | D | A | 0.1822 | |
| 350 | P | A | -0.3692 | |
| 351 | S | A | -0.1309 | |
| 352 | Y | A | 0.1851 | |
| 353 | F | A | -0.7086 | |
| 354 | K | A | -1.8433 | |
| 355 | N | A | -1.8178 | |
| 356 | Y | A | -0.1182 | |
| 357 | L | A | 0.5697 | |
| 358 | R | A | 0.8830 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4478 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0205 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9209 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6825 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3111 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3199 | |
| 376 | L | A | -1.7498 | |
| 377 | D | A | -2.0306 | |
| 378 | P | A | -1.0620 | |
| 379 | G | A | -1.0215 | |
| 380 | V | A | -0.9290 | |
| 381 | L | A | -0.5414 | |
| 382 | A | A | -0.6615 | |
| 383 | H | A | -0.8452 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4020 | |
| 386 | T | A | -0.5743 | |
| 387 | M | A | -0.3292 | |
| 388 | N | A | -0.8698 | |
| 389 | P | A | -1.2591 | |
| 390 | T | A | -1.4959 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5096 | |
| 393 | E | A | -2.8725 | |
| 394 | N | A | -2.5535 | |
| 395 | W | A | -1.5049 | |
| 396 | N | A | -1.4141 | |
| 397 | L | A | -0.2422 | |
| 398 | G | A | 0.5119 | |
| 399 | F | A | 2.3986 | |
| 400 | V | A | 1.8201 | |
| 401 | P | A | 0.0479 | |
| 402 | P | A | -1.8592 | |
| 403 | K | A | -3.4721 | |
| 404 | E | A | -3.7914 | |
| 405 | R | A | -3.9822 | |
| 406 | E | A | -3.7940 | |
| 407 | D | A | -2.8729 | |
| 408 | P | A | -1.7587 | |
| 409 | Y | A | -0.9954 | |
| 410 | K | A | -2.0983 | |
| 411 | G | A | -0.6404 | |
| 412 | L | A | 0.6616 | |
| 413 | I | A | 1.5767 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4042 | |
| 416 | E | A | -1.6877 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8523 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8902 | |
| 421 | E | A | -2.4882 | |
| 422 | R | A | -1.9802 | |
| 423 | F | A | -1.0107 | |
| 424 | S | A | -1.3231 | |
| 425 | Q | A | -1.8016 | |
| 426 | D | A | -2.9034 | |
| 427 | L | A | -2.0029 | |
| 428 | D | A | -2.7884 | |
| 429 | Q | A | -2.6183 | |
| 430 | F | A | -1.4521 | |
| 431 | A | A | -0.9096 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6083 | |
| 435 | K | A | -0.7460 | |
| 436 | F | A | 0.1508 | |
| 437 | L | A | 1.0234 | |
| 438 | Y | A | 0.8185 | |
| 439 | Q | A | -0.2693 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine