Project name: 9cf1af6120e5060

Status: done

Started: 2026-02-12 08:32:16
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Chain sequence(s) A: GGGHKGG
C: GGGHKGG
B: GGGHKGG
E: GGGHKGG
D: GGGHKGG
G: GGGHKGG
F: GGGHKGG
I: GGGHKGG
H: GGGHKGG
K: GGGHKGG
J: GGGHKGG
L: GGGHKGG
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:42)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:45)
Show buried residues

Minimal score value
-4.1346
Maximal score value
0.0
Average score
-1.9859
Total score value
-166.8121

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -1.2675
2 G A -1.3716
3 G A -2.0285
4 H A -2.9473
5 K A -3.6755
6 G A 0.0000
7 G A -1.8064
1 G B -1.1396
2 G B -1.3323
3 G B -1.8834
4 H B -2.6275
5 K B -3.4148
6 G B 0.0000
7 G B -1.6089
1 G C -1.1444
2 G C -1.3824
3 G C -2.0351
4 H C -2.6990
5 K C -3.4185
6 G C -2.2742
7 G C -1.5038
1 G D -1.2560
2 G D -1.4608
3 G D -2.1644
4 H D -3.0923
5 K D -3.9484
6 G D 0.0000
7 G D -1.9668
1 G E -1.1818
2 G E -1.2819
3 G E -1.7836
4 H E -2.9224
5 K E -3.9735
6 G E -3.2868
7 G E -1.8853
1 G F -1.1707
2 G F -1.2092
3 G F -1.7542
4 H F -2.7026
5 K F -3.6175
6 G F 0.0000
7 G F -1.8552
1 G G -1.2156
2 G G -1.2503
3 G G -1.7977
4 H G -3.0039
5 K G -3.8497
6 G G 0.0000
7 G G -1.9605
1 G H -1.2394
2 G H -1.5015
3 G H -2.1408
4 H H -3.3416
5 K H -4.1346
6 G H 0.0000
7 G H -2.0403
1 G I -1.0422
2 G I -1.5099
3 G I -2.0142
4 H I -3.1702
5 K I -3.7048
6 G I -2.8747
7 G I -1.6058
1 G J -1.0550
2 G J -1.4714
3 G J -1.8642
4 H J -3.0040
5 K J -3.6936
6 G J -3.0737
7 G J -1.6401
1 G K -1.2755
2 G K -1.4371
3 G K -1.9818
4 H K -2.8983
5 K K -3.6170
6 G K 0.0000
7 G K -1.8070
1 G L -1.2528
2 G L -1.3454
3 G L -1.8192
4 H L -2.6310
5 K L -3.7124
6 G L 0.0000
7 G L -1.7608
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Laboratory of Theory of Biopolymers 2018