| Chain sequence(s) |
A: MIAGVDQALAATGQASQRAAGASGGVTVGVGVGTEQRNLSVVAPSQFTFSSRSPDFVDETAGQSWCAILGLNQFHFAVTNDGVI
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:23)
[INFO] Main: Simulation completed successfully. (00:00:23)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.5818 | |
| 2 | I | A | 2.0588 | |
| 3 | A | A | 0.3917 | |
| 4 | G | A | -0.3115 | |
| 5 | V | A | -0.1174 | |
| 6 | D | A | -1.6634 | |
| 7 | Q | A | -1.7248 | |
| 8 | A | A | -1.3226 | |
| 9 | L | A | -1.0000 | |
| 10 | A | A | -1.0061 | |
| 11 | A | A | -0.6480 | |
| 12 | T | A | -0.5608 | |
| 13 | G | A | -0.7981 | |
| 14 | Q | A | -1.5113 | |
| 15 | A | A | -1.2262 | |
| 16 | S | A | -1.5210 | |
| 17 | Q | A | -1.8793 | |
| 18 | R | A | -1.4854 | |
| 19 | A | A | -1.0166 | |
| 20 | A | A | -0.6471 | |
| 21 | G | A | -0.6807 | |
| 22 | A | A | -0.5525 | |
| 23 | S | A | -0.5199 | |
| 24 | G | A | -0.2434 | |
| 25 | G | A | 0.3058 | |
| 26 | V | A | 0.2511 | |
| 27 | T | A | -0.4880 | |
| 28 | V | A | -0.5380 | |
| 29 | G | A | -1.8102 | |
| 30 | V | A | -1.2483 | |
| 31 | G | A | -1.7412 | |
| 32 | V | A | -1.7206 | |
| 33 | G | A | -1.6587 | |
| 34 | T | A | -1.4163 | |
| 35 | E | A | -2.8442 | |
| 36 | Q | A | -3.1041 | |
| 37 | R | A | -2.7770 | |
| 38 | N | A | -1.9588 | |
| 39 | L | A | -0.3855 | |
| 40 | S | A | 0.1352 | |
| 41 | V | A | 0.8563 | |
| 42 | V | A | 1.6378 | |
| 43 | A | A | 0.4613 | |
| 44 | P | A | 0.0241 | |
| 45 | S | A | -0.5166 | |
| 46 | Q | A | -0.8696 | |
| 47 | F | A | -0.0319 | |
| 48 | T | A | 0.3601 | |
| 49 | F | A | 0.6015 | |
| 50 | S | A | -0.4208 | |
| 51 | S | A | -1.2259 | |
| 52 | R | A | -2.0471 | |
| 53 | S | A | -1.1601 | |
| 54 | P | A | -0.9371 | |
| 55 | D | A | -1.2745 | |
| 56 | F | A | 0.1901 | |
| 57 | V | A | 0.2008 | |
| 58 | D | A | -1.8778 | |
| 59 | E | A | -2.2064 | |
| 60 | T | A | -1.5696 | |
| 61 | A | A | -1.7348 | |
| 62 | G | A | -1.9971 | |
| 63 | Q | A | -1.4362 | |
| 64 | S | A | -0.7735 | |
| 65 | W | A | 0.1068 | |
| 66 | C | A | 0.1664 | |
| 67 | A | A | 0.0000 | |
| 68 | I | A | 0.1540 | |
| 69 | L | A | -0.0841 | |
| 70 | G | A | -0.2805 | |
| 71 | L | A | 0.7324 | |
| 72 | N | A | -0.7191 | |
| 73 | Q | A | -0.8553 | |
| 74 | F | A | 0.2611 | |
| 75 | H | A | -0.0867 | |
| 76 | F | A | 0.6406 | |
| 77 | A | A | 0.4645 | |
| 78 | V | A | 0.0000 | |
| 79 | T | A | -0.6393 | |
| 80 | N | A | -2.1799 | |
| 81 | D | A | -1.7354 | |
| 82 | G | A | -0.4067 | |
| 83 | V | A | 2.0392 | |
| 84 | I | A | 2.7367 |