Project name: 9d4ff2651e83157

Status: done

Started: 2025-02-25 21:11:44
Settings
Chain sequence(s) A: MATLCLGHHSGVESPEFIENGWEGMVDGWYGFRHQNSEGRGQAAIKTEPTVENLNKLFEKTKKQLRENAEDMGNGCFKIYHKCDNACFQEILEKVKA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:26)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:27)
Show buried residues

Minimal score value
-4.0618
Maximal score value
0.6019
Average score
-1.4348
Total score value
-139.1736

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.4090
2 A A 0.0000
3 T A -0.4524
4 L A 0.0000
5 C A -0.5322
6 L A 0.0000
7 G A 0.0000
8 H A 0.0000
9 H A -1.0881
10 S A -1.5862
11 G A -1.1113
12 V A -0.8684
13 E A -2.2462
14 S A -2.0011
15 P A 0.0000
16 E A -2.5443
17 F A -1.5284
18 I A 0.0000
19 E A -3.0160
20 N A -2.9207
21 G A -1.9565
22 W A -1.2228
23 E A -2.0936
24 G A -1.1080
25 M A 0.0000
26 V A 0.6019
27 D A -1.2316
28 G A -0.9660
29 W A -0.5174
30 Y A 0.0000
31 G A 0.0000
32 F A 0.0000
33 R A -1.5856
34 H A 0.0000
35 Q A -2.2056
36 N A 0.0000
37 S A -1.7784
38 E A -2.7646
39 G A -2.3928
40 R A -3.0964
41 G A -2.1947
42 Q A -1.7343
43 A A -1.0555
44 A A -0.8813
45 I A 0.0000
46 K A -2.5067
47 T A -1.8357
48 E A -2.3011
49 P A -1.5959
50 T A -1.4897
51 V A -1.5399
52 E A -2.5807
53 N A -2.0861
54 L A 0.0000
55 N A -2.1661
56 K A -2.9887
57 L A -2.2177
58 F A 0.0000
59 E A -3.1413
60 K A -3.1647
61 T A 0.0000
62 K A -3.7844
63 K A -3.7530
64 Q A -2.9593
65 L A 0.0000
66 R A -4.0618
67 E A -3.4571
68 N A -2.3257
69 A A -2.1086
70 E A -2.1886
71 D A -1.8900
72 M A -0.6760
73 G A -0.8910
74 N A -1.6845
75 G A 0.0000
76 C A -0.7175
77 F A 0.0000
78 K A -0.7639
79 I A 0.0000
80 Y A -0.1195
81 H A -1.2609
82 K A -1.7938
83 C A 0.0000
84 D A -1.8498
85 N A -1.9508
86 A A -1.0844
87 C A -1.3059
88 F A 0.0000
89 Q A -2.7862
90 E A -3.2913
91 I A -2.4509
92 L A 0.0000
93 E A -4.0515
94 K A -3.7563
95 V A 0.0000
96 K A -3.0608
97 A A -1.8663
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Laboratory of Theory of Biopolymers 2018