Chain sequence(s) |
A: AYRPSETLCGGELVDTLQFVCGDRGFYFSRPASRVSRRSRGIVEECCFRSCDLALLETYCATPAKSE
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | LR13A |
Energy difference between WT (input) and mutated protein (by FoldX) | 10.7598 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] FoldX: Building mutant model (00:00:39) [INFO] FoldX: Starting FoldX energy minimalization (00:01:03) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:26) [INFO] Main: Simulation completed successfully. (00:01:26) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | A | A | -0.0469 | |
2 | Y | A | 0.1456 | |
3 | R | A | -1.8669 | |
4 | P | A | -1.4225 | |
5 | S | A | -1.7044 | |
6 | E | A | -2.3439 | |
7 | T | A | -1.0496 | |
8 | L | A | -0.7043 | |
9 | C | A | -0.5272 | |
10 | G | A | -0.9814 | |
11 | G | A | -1.4513 | |
12 | E | A | -2.1618 | |
13 | R | A | 0.0000 | mutated: LR13A |
14 | V | A | -0.7269 | |
15 | D | A | -1.6348 | |
16 | T | A | -0.7065 | |
17 | L | A | 0.0000 | |
18 | Q | A | -1.2142 | |
19 | F | A | 0.7472 | |
20 | V | A | 0.0621 | |
21 | C | A | 0.0000 | |
22 | G | A | -1.4414 | |
23 | D | A | -2.7920 | |
24 | R | A | -3.1283 | |
25 | G | A | -1.1517 | |
26 | F | A | 0.2610 | |
27 | Y | A | 1.5347 | |
28 | F | A | 1.3834 | |
29 | S | A | 0.2248 | |
30 | R | A | -0.6992 | |
31 | P | A | -1.0724 | |
32 | A | A | -1.7065 | |
33 | S | A | -1.5965 | |
34 | R | A | -1.7026 | |
35 | V | A | -0.2656 | |
36 | S | A | -1.2741 | |
37 | R | A | -2.6799 | |
38 | R | A | -3.0175 | |
39 | S | A | -1.8478 | |
40 | R | A | -1.3061 | |
41 | G | A | -0.8216 | |
42 | I | A | 0.0000 | |
43 | V | A | -0.5502 | |
44 | E | A | -1.5057 | |
45 | E | A | 0.0000 | |
46 | C | A | 0.0000 | |
47 | C | A | -0.2550 | |
48 | F | A | 0.4771 | |
49 | R | A | -1.4907 | |
50 | S | A | -1.3327 | |
51 | C | A | 0.0000 | |
52 | D | A | -1.5504 | |
53 | L | A | -0.6482 | |
54 | A | A | -0.5133 | |
55 | L | A | -0.5392 | |
56 | L | A | 0.0000 | |
57 | E | A | -1.4229 | |
58 | T | A | -0.4643 | |
59 | Y | A | 0.0000 | |
60 | C | A | -0.5090 | |
61 | A | A | -0.6085 | |
62 | T | A | -1.0273 | |
63 | P | A | -0.9297 | |
64 | A | A | -1.6615 | |
65 | K | A | -2.6030 | |
66 | S | A | -2.6128 | |
67 | E | A | -2.7730 |