| Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:06)
[INFO] Main: Simulation completed successfully. (00:01:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.0619 | |
| 2 | V | H | -1.2865 | |
| 3 | Q | H | -1.3045 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.1426 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.4231 | |
| 8 | G | H | -0.7737 | |
| 9 | G | H | 0.0863 | |
| 11 | G | H | 0.8474 | |
| 12 | L | H | 1.3405 | |
| 13 | V | H | 0.0000 | |
| 14 | Q | H | -1.3990 | |
| 15 | P | H | -1.6928 | |
| 16 | G | H | -1.5578 | |
| 17 | G | H | -1.1414 | |
| 18 | S | H | -1.5090 | |
| 19 | L | H | -1.1669 | |
| 20 | R | H | -2.2425 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.5073 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.2850 | |
| 25 | A | H | -0.6129 | |
| 26 | S | H | -0.9105 | |
| 27 | G | H | -1.2560 | |
| 28 | F | H | -1.1806 | |
| 29 | N | H | -1.8514 | |
| 30 | I | H | 0.0000 | |
| 35 | K | H | -2.3871 | |
| 36 | D | H | -2.7687 | |
| 37 | T | H | 0.0000 | |
| 38 | Y | H | -0.4841 | |
| 39 | I | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.6314 | |
| 45 | A | H | -1.0311 | |
| 46 | P | H | -0.8262 | |
| 47 | G | H | -1.4625 | |
| 48 | K | H | -2.3858 | |
| 49 | G | H | -1.6710 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.0337 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | R | H | -0.2612 | |
| 56 | I | H | 0.0000 | |
| 57 | Y | H | -0.3486 | |
| 58 | P | H | -0.9724 | |
| 59 | T | H | -1.1168 | |
| 62 | N | H | -0.9016 | |
| 63 | G | H | -0.4522 | |
| 64 | Y | H | 0.6756 | |
| 65 | T | H | -0.0170 | |
| 66 | R | H | -1.0512 | |
| 67 | Y | H | -1.3968 | |
| 68 | A | H | -1.6120 | |
| 69 | D | H | -2.6076 | |
| 70 | S | H | -1.7754 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.7559 | |
| 74 | G | H | -1.8147 | |
| 75 | R | H | -1.7046 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -1.2021 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.1663 | |
| 80 | A | H | -0.7789 | |
| 81 | D | H | -1.2548 | |
| 82 | T | H | -1.3966 | |
| 83 | S | H | -1.4333 | |
| 84 | K | H | -2.1222 | |
| 85 | N | H | -1.5635 | |
| 86 | T | H | -0.8138 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.5368 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.7149 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -2.0081 | |
| 93 | S | H | -1.4679 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.4334 | |
| 96 | A | H | -1.7379 | |
| 97 | E | H | -2.2574 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.3869 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.7142 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | S | H | 0.0000 | |
| 106 | R | H | -0.3329 | |
| 107 | W | H | 0.0000 | |
| 108 | G | H | -0.5877 | |
| 109 | G | H | -1.3130 | |
| 110 | D | H | -2.1710 | |
| 111 | G | H | -1.1324 | |
| 112 | F | H | -0.3882 | |
| 113 | Y | H | -0.0137 | |
| 114 | A | H | 0.0000 | |
| 115 | M | H | 0.0000 | |
| 116 | D | H | -0.3058 | |
| 117 | Y | H | -0.4208 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.5489 | |
| 121 | G | H | -0.4460 | |
| 122 | T | H | 0.4643 | |
| 123 | L | H | 1.6945 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.3178 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.5870 | |
| 128 | S | H | -0.5636 | |
| 1 | D | L | -2.2351 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.3046 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.4314 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.8683 | |
| 8 | P | L | -0.6184 | |
| 9 | S | L | -0.8554 | |
| 10 | S | L | -0.8481 | |
| 11 | L | L | -0.6149 | |
| 12 | S | L | -0.9808 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.9601 | |
| 15 | V | L | -0.0781 | |
| 16 | G | L | -0.9502 | |
| 17 | D | L | -2.2081 | |
| 18 | R | L | -2.5252 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6723 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.7315 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.7018 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -2.0480 | |
| 27 | Q | L | -2.4594 | |
| 28 | D | L | -2.0884 | |
| 29 | V | L | 0.0000 | |
| 36 | N | L | -1.4432 | |
| 37 | T | L | -0.7793 | |
| 38 | A | L | -0.0674 | |
| 39 | V | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.7331 | |
| 46 | P | L | -1.1880 | |
| 47 | G | L | -1.6679 | |
| 48 | K | L | -2.7006 | |
| 49 | A | L | -1.7890 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.9201 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 1.1606 | |
| 56 | S | L | 0.4805 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | 0.7576 | |
| 66 | F | L | 2.2536 | |
| 67 | L | L | 1.5575 | |
| 68 | Y | L | 0.6997 | |
| 69 | S | L | 0.0823 | |
| 70 | G | L | -0.3837 | |
| 71 | V | L | -0.2454 | |
| 72 | P | L | -0.2689 | |
| 74 | S | L | -0.3274 | |
| 75 | R | L | -0.6883 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | 0.1005 | |
| 78 | G | L | 0.1046 | |
| 79 | S | L | -0.5243 | |
| 80 | R | L | -1.5341 | |
| 83 | S | L | -1.1733 | |
| 84 | G | L | -1.6020 | |
| 85 | T | L | -1.9321 | |
| 86 | D | L | -1.8525 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7405 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.5981 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.3484 | |
| 93 | S | L | -1.3366 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.8704 | |
| 96 | P | L | -0.8875 | |
| 97 | E | L | -1.6193 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.2671 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.7763 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | H | L | 0.2916 | |
| 108 | Y | L | 0.4619 | |
| 109 | T | L | 0.0144 | |
| 114 | T | L | -0.3796 | |
| 115 | P | L | -0.7728 | |
| 116 | P | L | 0.0000 | |
| 117 | T | L | -0.7770 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.8995 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.3747 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -1.1291 | |
| 126 | I | L | -0.4814 | |
| 127 | K | L | -1.5302 |