| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFRDIVVDGKVLVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPLHEGADVRVAFSYDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPEGLPLPDAPPPSPLYVPPPPSSPTAVRPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPAPKVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9448 | |
| 2 | L | A | 1.9669 | |
| 3 | P | A | 0.6473 | |
| 4 | P | A | 0.3259 | |
| 5 | T | A | 0.0826 | |
| 6 | T | A | -0.0277 | |
| 7 | P | A | 0.2458 | |
| 8 | V | A | 1.2173 | |
| 9 | A | A | 0.0582 | |
| 10 | K | A | -0.9923 | |
| 11 | V | A | -0.1582 | |
| 12 | Q | A | -1.3962 | |
| 13 | S | A | -1.5492 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4315 | |
| 16 | E | A | -2.4423 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4573 | |
| 20 | P | A | 0.1050 | |
| 21 | T | A | 0.1099 | |
| 22 | S | A | -0.1718 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1115 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2780 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8805 | |
| 31 | R | A | -2.6629 | |
| 32 | L | A | -0.7841 | |
| 33 | L | A | 1.1621 | |
| 34 | T | A | 1.3623 | |
| 35 | V | A | 1.8107 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2890 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6812 | |
| 40 | R | A | -1.7924 | |
| 41 | D | A | -0.7302 | |
| 42 | I | A | 1.2267 | |
| 43 | V | A | 2.1143 | |
| 44 | V | A | 1.4688 | |
| 45 | D | A | -1.0221 | |
| 46 | G | A | -0.6070 | |
| 47 | K | A | -0.2761 | |
| 48 | V | A | 1.9198 | |
| 49 | L | A | 2.4670 | |
| 50 | V | A | 1.4099 | |
| 51 | P | A | 0.2983 | |
| 52 | K | A | -0.7389 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1583 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4064 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2754 | |
| 70 | K | A | -1.7975 | |
| 71 | F | A | -0.6480 | |
| 72 | A | A | -0.5714 | |
| 73 | L | A | -0.8675 | |
| 74 | P | A | -1.2793 | |
| 75 | Q | A | -2.4992 | |
| 76 | K | A | -3.1003 | |
| 77 | D | A | -2.9831 | |
| 78 | F | A | -1.6605 | |
| 79 | Y | A | -1.8732 | |
| 80 | D | A | -2.6664 | |
| 81 | P | A | -2.2927 | |
| 82 | E | A | -3.0384 | |
| 83 | K | A | -3.3870 | |
| 84 | E | A | -2.4460 | |
| 85 | R | A | -1.2786 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6389 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9609 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3308 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6908 | |
| 99 | G | A | -0.5480 | |
| 100 | P | A | -0.4152 | |
| 101 | L | A | 0.0212 | |
| 102 | G | A | -0.2042 | |
| 103 | K | A | -0.5697 | |
| 104 | G | A | -0.4151 | |
| 105 | T | A | -0.4333 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1507 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4264 | |
| 110 | L | A | 0.4134 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -0.9429 | |
| 113 | K | A | -0.2729 | |
| 114 | L | A | -0.9920 | |
| 115 | G | A | -0.8810 | |
| 116 | D | A | -1.1999 | |
| 117 | T | A | -0.8669 | |
| 118 | E | A | -1.8020 | |
| 119 | N | A | -1.9806 | |
| 120 | P | A | -1.3435 | |
| 121 | T | A | -0.6834 | |
| 122 | A | A | -0.4269 | |
| 123 | P | A | -0.6352 | |
| 124 | L | A | -0.7026 | |
| 125 | H | A | -1.7446 | |
| 126 | E | A | -2.6689 | |
| 127 | G | A | -2.0434 | |
| 128 | A | A | -1.4361 | |
| 129 | D | A | -2.1365 | |
| 130 | V | A | -1.4097 | |
| 131 | R | A | -0.7035 | |
| 132 | V | A | 0.4552 | |
| 133 | A | A | 0.4544 | |
| 134 | F | A | 0.2805 | |
| 135 | S | A | -0.0667 | |
| 136 | Y | A | 0.0000 | |
| 137 | D | A | -0.4269 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5525 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1941 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1583 | |
| 157 | D | A | 0.3297 | |
| 158 | I | A | 0.8552 | |
| 159 | A | A | 0.1254 | |
| 160 | E | A | -1.4743 | |
| 161 | P | A | -0.2281 | |
| 162 | C | A | 0.1861 | |
| 163 | P | A | -0.1661 | |
| 164 | G | A | -0.0740 | |
| 165 | L | A | 0.6018 | |
| 166 | P | A | -0.1062 | |
| 167 | P | A | -0.3359 | |
| 168 | G | A | -0.4227 | |
| 169 | A | A | 0.2736 | |
| 170 | C | A | 1.0755 | |
| 171 | P | A | 0.5591 | |
| 172 | P | A | 0.7962 | |
| 173 | I | A | 2.0598 | |
| 174 | Q | A | 0.8674 | |
| 175 | L | A | 1.4518 | |
| 176 | V | A | 0.8409 | |
| 177 | N | A | -0.3067 | |
| 178 | S | A | -0.0959 | |
| 179 | V | A | 0.4199 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3829 | |
| 182 | D | A | 0.0738 | |
| 183 | G | A | -0.1577 | |
| 184 | D | A | -0.5243 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1385 | |
| 190 | F | A | 0.0695 | |
| 191 | G | A | -0.1017 | |
| 192 | N | A | -0.2479 | |
| 193 | M | A | -0.0995 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3507 | |
| 197 | E | A | -2.5778 | |
| 198 | L | A | -1.1948 | |
| 199 | Q | A | -2.5373 | |
| 200 | Q | A | -3.2961 | |
| 201 | D | A | -3.5786 | |
| 202 | R | A | -3.3327 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1874 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3296 | |
| 211 | S | A | -1.9045 | |
| 212 | T | A | -1.4199 | |
| 213 | R | A | -2.0186 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1496 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3815 | |
| 220 | L | A | 0.6179 | |
| 221 | K | A | -1.0877 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8075 | |
| 224 | N | A | -1.4853 | |
| 225 | E | A | -1.2224 | |
| 226 | A | A | -0.5988 | |
| 227 | Y | A | -0.3620 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6772 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0759 | |
| 234 | F | A | 0.2745 | |
| 235 | G | A | -0.8067 | |
| 236 | R | A | -2.5888 | |
| 237 | R | A | -2.8427 | |
| 238 | E | A | -2.0989 | |
| 239 | Q | A | -0.1500 | |
| 240 | V | A | 1.4686 | |
| 241 | Y | A | 1.1239 | |
| 242 | A | A | 0.2265 | |
| 243 | R | A | -0.8890 | |
| 244 | H | A | -0.9614 | |
| 245 | F | A | -0.0264 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.4954 | |
| 249 | A | A | -1.2481 | |
| 250 | G | A | -1.1221 | |
| 251 | P | A | -0.7879 | |
| 252 | E | A | -0.5449 | |
| 253 | G | A | -0.0246 | |
| 254 | L | A | 1.1046 | |
| 255 | P | A | -0.1464 | |
| 256 | L | A | 0.1500 | |
| 257 | P | A | -0.5052 | |
| 258 | D | A | -1.7505 | |
| 259 | A | A | -0.6369 | |
| 260 | P | A | -0.7105 | |
| 261 | P | A | -0.2063 | |
| 262 | P | A | 0.0672 | |
| 263 | S | A | 0.2784 | |
| 264 | P | A | 0.7049 | |
| 265 | L | A | 1.6778 | |
| 266 | Y | A | 1.5260 | |
| 267 | V | A | 1.9197 | |
| 268 | P | A | 0.4184 | |
| 269 | P | A | 0.1911 | |
| 270 | P | A | -0.3520 | |
| 271 | P | A | -0.3424 | |
| 272 | S | A | -0.3177 | |
| 273 | S | A | -0.1761 | |
| 274 | P | A | -0.1451 | |
| 275 | T | A | -0.0321 | |
| 276 | A | A | 0.2480 | |
| 277 | V | A | 1.1485 | |
| 278 | R | A | -0.1413 | |
| 279 | P | A | -0.6928 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.2294 | |
| 282 | D | A | -0.6053 | |
| 283 | Y | A | 0.8376 | |
| 284 | F | A | 0.6751 | |
| 285 | G | A | 0.2215 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9481 | |
| 291 | L | A | 1.6309 | |
| 292 | V | A | 0.6337 | |
| 293 | S | A | -0.1595 | |
| 294 | S | A | -0.9644 | |
| 295 | D | A | -1.8429 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.0976 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6298 | |
| 301 | R | A | -1.8594 | |
| 302 | P | A | -0.9726 | |
| 303 | F | A | -0.1812 | |
| 304 | W | A | -0.5536 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0781 | |
| 307 | R | A | -2.8329 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2542 | |
| 310 | G | A | -1.2251 | |
| 311 | N | A | -1.2672 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7918 | |
| 319 | N | A | -0.9239 | |
| 320 | E | A | -1.0283 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3461 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0728 | |
| 333 | N | A | 0.5574 | |
| 334 | F | A | 1.7648 | |
| 335 | T | A | 0.8870 | |
| 336 | I | A | 0.4809 | |
| 337 | S | A | -0.8178 | |
| 338 | Q | A | -1.4876 | |
| 339 | Q | A | -0.8889 | |
| 340 | L | A | 0.7798 | |
| 341 | C | A | 0.4157 | |
| 342 | T | A | 0.1428 | |
| 343 | P | A | -0.3428 | |
| 344 | A | A | 0.0008 | |
| 345 | P | A | 0.0230 | |
| 346 | K | A | -0.7096 | |
| 347 | V | A | 1.3540 | |
| 348 | Y | A | 1.3579 | |
| 349 | D | A | 0.0215 | |
| 350 | P | A | -0.3363 | |
| 351 | S | A | -0.2701 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.5779 | |
| 354 | K | A | -1.6692 | |
| 355 | N | A | -1.6949 | |
| 356 | Y | A | -0.0641 | |
| 357 | L | A | 0.6483 | |
| 358 | R | A | 0.9611 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3806 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0737 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9874 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6765 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3003 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3141 | |
| 376 | L | A | -1.7159 | |
| 377 | D | A | -2.0067 | |
| 378 | P | A | -1.0439 | |
| 379 | G | A | -1.0155 | |
| 380 | V | A | -0.9343 | |
| 381 | L | A | -0.5296 | |
| 382 | A | A | -0.6769 | |
| 383 | H | A | -0.8047 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3921 | |
| 386 | T | A | -0.5339 | |
| 387 | M | A | -0.2902 | |
| 388 | N | A | -0.8552 | |
| 389 | P | A | -1.2313 | |
| 390 | T | A | -1.4127 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4022 | |
| 393 | E | A | -2.7292 | |
| 394 | N | A | -2.4905 | |
| 395 | W | A | -1.3147 | |
| 396 | N | A | -1.0480 | |
| 397 | L | A | -0.1776 | |
| 398 | G | A | 0.5461 | |
| 399 | F | A | 2.4243 | |
| 400 | V | A | 1.8430 | |
| 401 | P | A | 0.0583 | |
| 402 | P | A | -1.7596 | |
| 403 | K | A | -3.2931 | |
| 404 | E | A | -3.8080 | |
| 405 | R | A | -3.8113 | |
| 406 | E | A | -3.7429 | |
| 407 | D | A | -2.8631 | |
| 408 | P | A | -1.7585 | |
| 409 | Y | A | -0.9965 | |
| 410 | K | A | -2.1147 | |
| 411 | G | A | -0.6483 | |
| 412 | L | A | 0.6643 | |
| 413 | I | A | 1.5796 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4072 | |
| 416 | E | A | -1.7147 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9501 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0469 | |
| 421 | E | A | -2.7619 | |
| 422 | R | A | -2.5240 | |
| 423 | F | A | -1.2639 | |
| 424 | S | A | -1.4679 | |
| 425 | Q | A | -1.8077 | |
| 426 | D | A | -2.9173 | |
| 427 | L | A | -2.0095 | |
| 428 | D | A | -2.8048 | |
| 429 | Q | A | -2.6369 | |
| 430 | F | A | -1.4398 | |
| 431 | A | A | -0.9113 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6105 | |
| 435 | K | A | -0.7188 | |
| 436 | F | A | 0.1378 | |
| 437 | L | A | 1.0172 | |
| 438 | Y | A | 0.8194 | |
| 439 | Q | A | -0.2782 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine