| Chain sequence(s) |
A: GQPRPSPGARAPVLQSFQEDQFQGHWFVLGLAGSTYSRVHRALLGPFTATFEQKEKKRLEVSYAMTRGRSCITWSYVLIPAAQPGKFSVDNSREPEADAEELQVHSTDYTTFALMVSRRQSRTRARSLLRVYLLCRMWAVETQALDRFACLLRAQGLTEDNVVFPGVKENVLKD
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:45)
[INFO] Main: Simulation completed successfully. (00:01:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 3 | G | A | -1.2731 | |
| 4 | Q | A | -1.9242 | |
| 5 | P | A | -1.7404 | |
| 6 | R | A | -2.0153 | |
| 7 | P | A | 0.0000 | |
| 8 | S | A | -0.8838 | |
| 9 | P | A | -1.1137 | |
| 10 | G | A | -1.2896 | |
| 11 | A | A | -1.3264 | |
| 12 | R | A | -2.1834 | |
| 13 | A | A | -1.0113 | |
| 14 | P | A | -0.5950 | |
| 15 | V | A | -0.1380 | |
| 16 | L | A | -0.4407 | |
| 17 | Q | A | -1.3145 | |
| 18 | S | A | -0.8715 | |
| 19 | F | A | -1.2187 | |
| 20 | Q | A | -2.1993 | |
| 21 | E | A | -2.9570 | |
| 22 | D | A | -3.5012 | |
| 23 | Q | A | -2.3321 | |
| 24 | F | A | 0.0000 | |
| 25 | Q | A | -2.7229 | |
| 26 | G | A | -2.0045 | |
| 27 | H | A | -1.7001 | |
| 28 | W | A | 0.0000 | |
| 29 | F | A | -0.1537 | |
| 30 | V | A | 0.0000 | |
| 31 | L | A | 0.0000 | |
| 32 | G | A | 0.0000 | |
| 33 | L | A | 0.1565 | |
| 34 | A | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | S | A | -0.5368 | |
| 37 | T | A | -0.1156 | |
| 38 | Y | A | -0.6084 | |
| 39 | S | A | -1.1668 | |
| 40 | R | A | -1.6942 | |
| 41 | V | A | 0.0124 | |
| 42 | H | A | -1.2204 | |
| 43 | R | A | -1.8087 | |
| 44 | A | A | -0.5770 | |
| 45 | L | A | -0.2754 | |
| 46 | L | A | -0.3989 | |
| 47 | G | A | -0.5930 | |
| 48 | P | A | 0.2682 | |
| 49 | F | A | 0.0000 | |
| 50 | T | A | -0.1848 | |
| 51 | A | A | 0.0000 | |
| 52 | T | A | -1.0536 | |
| 53 | F | A | 0.0000 | |
| 54 | E | A | -3.6106 | |
| 55 | Q | A | -4.0400 | |
| 56 | K | A | -3.6204 | |
| 57 | E | A | -3.8657 | |
| 58 | K | A | -3.6572 | |
| 59 | K | A | -3.3126 | |
| 60 | R | A | -2.7309 | |
| 61 | L | A | 0.0000 | |
| 62 | E | A | -1.8404 | |
| 63 | V | A | 0.0000 | |
| 64 | S | A | -0.2927 | |
| 65 | Y | A | 0.3862 | |
| 66 | A | A | 0.4679 | |
| 67 | M | A | 0.0000 | |
| 68 | T | A | -0.6346 | |
| 69 | R | A | -1.9075 | |
| 70 | G | A | -1.9894 | |
| 71 | R | A | -2.5644 | |
| 72 | S | A | -1.1993 | |
| 73 | C | A | 0.2373 | |
| 74 | I | A | 1.5081 | |
| 75 | T | A | 1.0441 | |
| 76 | W | A | 0.8100 | |
| 77 | S | A | 0.0640 | |
| 78 | Y | A | 0.3528 | |
| 79 | V | A | -0.7517 | |
| 80 | L | A | 0.0000 | |
| 81 | I | A | -0.7704 | |
| 82 | P | A | -0.7773 | |
| 83 | A | A | -0.4375 | |
| 84 | A | A | -0.5129 | |
| 85 | Q | A | -1.2160 | |
| 86 | P | A | -0.9630 | |
| 87 | G | A | 0.0000 | |
| 88 | K | A | -0.6077 | |
| 89 | F | A | 0.0000 | |
| 90 | S | A | -0.6140 | |
| 91 | V | A | 0.0000 | |
| 92 | D | A | -1.2294 | |
| 93 | N | A | -1.8931 | |
| 94 | S | A | -2.2329 | |
| 95 | R | A | -3.2018 | |
| 96 | E | A | -3.4529 | |
| 97 | P | A | -2.4639 | |
| 98 | E | A | -2.9327 | |
| 99 | A | A | -2.5510 | |
| 100 | D | A | -2.1211 | |
| 101 | A | A | -1.3695 | |
| 102 | E | A | 0.0000 | |
| 103 | E | A | -1.1718 | |
| 104 | L | A | 0.0000 | |
| 105 | Q | A | 0.0000 | |
| 106 | V | A | 0.0000 | |
| 107 | H | A | 0.0000 | |
| 108 | S | A | -0.1732 | |
| 109 | T | A | -0.4713 | |
| 110 | D | A | -1.2264 | |
| 111 | Y | A | -0.9314 | |
| 112 | T | A | -0.6512 | |
| 113 | T | A | -0.8368 | |
| 114 | F | A | 0.0000 | |
| 115 | A | A | 0.0000 | |
| 116 | L | A | 0.0000 | |
| 117 | M | A | 0.0000 | |
| 118 | V | A | 0.0000 | |
| 119 | S | A | 0.0000 | |
| 120 | R | A | -1.3636 | |
| 121 | R | A | -1.7156 | |
| 122 | Q | A | -2.4435 | |
| 123 | S | A | -2.8134 | |
| 124 | R | A | -3.3941 | |
| 125 | T | A | -2.5453 | |
| 126 | R | A | -2.8816 | |
| 127 | A | A | -2.2277 | |
| 128 | R | A | -3.3662 | |
| 129 | S | A | -2.1264 | |
| 130 | L | A | -0.9855 | |
| 131 | L | A | -0.8009 | |
| 132 | R | A | -0.3717 | |
| 133 | V | A | 0.0000 | |
| 134 | Y | A | 0.0000 | |
| 135 | L | A | 0.0000 | |
| 136 | L | A | 0.0000 | |
| 137 | C | A | 0.0000 | |
| 138 | R | A | -1.7987 | |
| 139 | M | A | -0.4110 | |
| 140 | W | A | 0.2664 | |
| 141 | A | A | -0.0829 | |
| 142 | V | A | -0.7848 | |
| 143 | E | A | -2.2225 | |
| 144 | T | A | -2.0065 | |
| 145 | Q | A | -2.4833 | |
| 146 | A | A | -1.8704 | |
| 147 | L | A | -1.5771 | |
| 148 | D | A | -2.7045 | |
| 149 | R | A | -2.0981 | |
| 150 | F | A | 0.0000 | |
| 151 | A | A | -1.6126 | |
| 152 | C | A | -1.5330 | |
| 153 | L | A | 0.0000 | |
| 154 | L | A | 0.0000 | |
| 155 | R | A | -2.3814 | |
| 156 | A | A | -1.6132 | |
| 157 | Q | A | 0.0000 | |
| 158 | G | A | -1.4804 | |
| 159 | L | A | 0.0000 | |
| 160 | T | A | -1.9598 | |
| 161 | E | A | -3.0571 | |
| 162 | D | A | -2.6862 | |
| 163 | N | A | 0.0000 | |
| 164 | V | A | -1.1633 | |
| 165 | V | A | 0.0000 | |
| 166 | F | A | 0.5840 | |
| 167 | P | A | 0.0889 | |
| 168 | G | A | -0.8552 | |
| 169 | V | A | -1.0124 | |
| 170 | K | A | -2.5392 | |
| 171 | E | A | -1.9875 | |
| 172 | N | A | -0.3005 | |
| 173 | V | A | 1.0131 | |
| 174 | L | A | 0.0633 | |
| 175 | K | A | -1.4475 | |
| 176 | D | A | -2.1436 |