| Chain sequence(s) |
A: GKRRVSYFYEPMIGDYYYGVNQPTKPQRIRVTHNLILSYNLHRHMEINHPDLADASDFEKFHSLEYINFLKSVTPETVTDPHPSVSENLKRFNVDVDWDGPVFHNLFDYCRAYAGGSISAAAKLNRQEADIAINWAGGMHHVKKDKASGFGYVNDVVLAILELLKSFKRVLYIEIGFPHGDEVEEAFKDTDRVMTVSFHKVGDTGDISDYGEGKGQYYSLNAPLKDGLDDFSLRGLFIPVIHRAMEIYEPEVIVLQCGADSLAGDPFGTFNLSIKGHGDCLQYVRSFNVPLMILGGGGYTLPNVARCWCYETAIAVGEQLDNDLPGNDYMKYFRPDYKLHILPTNRQNLNTRLDIITMRETLLAQLSLVMHAPSVP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:18)
[INFO] Main: Simulation completed successfully. (00:04:21)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 8 | G | A | -1.5551 | |
| 9 | K | A | -2.6103 | |
| 10 | R | A | -2.4000 | |
| 11 | R | A | -3.0696 | |
| 12 | V | A | 0.0000 | |
| 13 | S | A | 0.0000 | |
| 14 | Y | A | 0.0000 | |
| 15 | F | A | 0.0000 | |
| 16 | Y | A | 0.0000 | |
| 17 | E | A | 0.0000 | |
| 18 | P | A | -0.2039 | |
| 19 | M | A | 0.5595 | |
| 20 | I | A | 0.0000 | |
| 21 | G | A | 0.0000 | |
| 22 | D | A | -0.1155 | |
| 23 | Y | A | 0.1403 | |
| 24 | Y | A | 0.0000 | |
| 25 | Y | A | -0.3426 | |
| 26 | G | A | 0.0654 | |
| 27 | V | A | 0.8464 | |
| 28 | N | A | -0.7859 | |
| 29 | Q | A | -0.8001 | |
| 30 | P | A | -0.5998 | |
| 31 | T | A | -0.8896 | |
| 32 | K | A | -1.1468 | |
| 33 | P | A | -0.5847 | |
| 34 | Q | A | 0.0000 | |
| 35 | R | A | 0.0000 | |
| 36 | I | A | 0.0000 | |
| 37 | R | A | -0.4637 | |
| 38 | V | A | 0.0000 | |
| 39 | T | A | 0.0000 | |
| 40 | H | A | -0.2111 | |
| 41 | N | A | -0.6270 | |
| 42 | L | A | 0.0000 | |
| 43 | I | A | 0.0000 | |
| 44 | L | A | -0.0369 | |
| 45 | S | A | -0.3935 | |
| 46 | Y | A | -0.7955 | |
| 47 | N | A | -1.1740 | |
| 48 | L | A | 0.0000 | |
| 49 | H | A | -1.6870 | |
| 50 | R | A | -2.5974 | |
| 51 | H | A | -2.5631 | |
| 52 | M | A | -1.8376 | |
| 53 | E | A | -2.1450 | |
| 54 | I | A | -0.5388 | |
| 55 | N | A | -0.8763 | |
| 56 | H | A | -1.4576 | |
| 57 | P | A | 0.0000 | |
| 58 | D | A | -1.9737 | |
| 59 | L | A | -1.0778 | |
| 60 | A | A | 0.0000 | |
| 61 | D | A | -1.8842 | |
| 62 | A | A | -1.7913 | |
| 63 | S | A | -1.7745 | |
| 64 | D | A | -2.3127 | |
| 65 | F | A | 0.0000 | |
| 66 | E | A | -3.2251 | |
| 67 | K | A | -2.8077 | |
| 68 | F | A | 0.0000 | |
| 69 | H | A | 0.0000 | |
| 70 | S | A | -1.5499 | |
| 71 | L | A | -0.6354 | |
| 72 | E | A | -1.8084 | |
| 73 | Y | A | 0.0000 | |
| 74 | I | A | 0.0000 | |
| 75 | N | A | -2.1430 | |
| 76 | F | A | 0.0000 | |
| 77 | L | A | 0.0000 | |
| 78 | K | A | -1.8472 | |
| 79 | S | A | -1.2173 | |
| 80 | V | A | 0.0000 | |
| 81 | T | A | -0.9684 | |
| 82 | P | A | -1.1719 | |
| 83 | E | A | -2.1825 | |
| 84 | T | A | -1.4118 | |
| 85 | V | A | 0.0000 | |
| 86 | T | A | -1.5466 | |
| 87 | D | A | -2.4133 | |
| 88 | P | A | -2.0028 | |
| 89 | H | A | -1.8062 | |
| 90 | P | A | -1.5049 | |
| 91 | S | A | -1.1879 | |
| 92 | V | A | -1.5970 | |
| 93 | S | A | -2.1577 | |
| 94 | E | A | -3.3771 | |
| 95 | N | A | -2.6596 | |
| 96 | L | A | 0.0000 | |
| 97 | K | A | -4.0764 | |
| 98 | R | A | -3.8234 | |
| 99 | F | A | 0.0000 | |
| 100 | N | A | -3.5363 | |
| 101 | V | A | 0.0000 | |
| 102 | D | A | -2.6783 | |
| 103 | V | A | -1.5722 | |
| 104 | D | A | -2.0900 | |
| 105 | W | A | -1.0466 | |
| 106 | D | A | -0.8262 | |
| 107 | G | A | 0.0000 | |
| 108 | P | A | 0.0000 | |
| 109 | V | A | 0.0000 | |
| 110 | F | A | -0.2823 | |
| 111 | H | A | -0.4854 | |
| 112 | N | A | -0.5887 | |
| 113 | L | A | 0.0000 | |
| 114 | F | A | -0.7275 | |
| 115 | D | A | -0.7452 | |
| 116 | Y | A | 0.0000 | |
| 117 | C | A | 0.0000 | |
| 118 | R | A | -1.0124 | |
| 119 | A | A | 0.0000 | |
| 120 | Y | A | 0.0000 | |
| 121 | A | A | 0.0000 | |
| 122 | G | A | 0.0000 | |
| 123 | G | A | 0.0000 | |
| 124 | S | A | 0.0000 | |
| 125 | I | A | -0.0806 | |
| 126 | S | A | -0.5600 | |
| 127 | A | A | 0.0000 | |
| 128 | A | A | 0.0000 | |
| 129 | A | A | -1.2522 | |
| 130 | K | A | -1.8201 | |
| 131 | L | A | 0.0000 | |
| 132 | N | A | -2.2044 | |
| 133 | R | A | -3.1968 | |
| 134 | Q | A | -3.3518 | |
| 135 | E | A | -3.4508 | |
| 136 | A | A | 0.0000 | |
| 137 | D | A | -2.1197 | |
| 138 | I | A | 0.0000 | |
| 139 | A | A | 0.0000 | |
| 140 | I | A | 0.0000 | |
| 141 | N | A | 0.0000 | |
| 142 | W | A | 0.0000 | |
| 143 | A | A | 0.0000 | |
| 144 | G | A | 0.0000 | |
| 145 | G | A | 0.0000 | |
| 146 | M | A | 0.0000 | |
| 147 | H | A | 0.0000 | |
| 148 | H | A | -1.0387 | |
| 149 | V | A | 0.0000 | |
| 150 | K | A | -2.3862 | |
| 151 | K | A | -2.5618 | |
| 152 | D | A | -2.4197 | |
| 153 | K | A | -2.7368 | |
| 154 | A | A | 0.0000 | |
| 155 | S | A | -1.1769 | |
| 156 | G | A | -0.7953 | |
| 157 | F | A | -0.1584 | |
| 158 | G | A | 0.0000 | |
| 159 | Y | A | 0.0000 | |
| 160 | V | A | 0.0000 | |
| 161 | N | A | 0.0000 | |
| 162 | D | A | 0.0000 | |
| 163 | V | A | 0.0000 | |
| 164 | V | A | 0.0000 | |
| 165 | L | A | 0.0000 | |
| 166 | A | A | 0.0000 | |
| 167 | I | A | 0.0000 | |
| 168 | L | A | -0.2573 | |
| 169 | E | A | -0.4966 | |
| 170 | L | A | 0.0000 | |
| 171 | L | A | -1.0304 | |
| 172 | K | A | -1.8646 | |
| 173 | S | A | -1.6182 | |
| 174 | F | A | 0.0000 | |
| 175 | K | A | -1.7119 | |
| 176 | R | A | -1.5602 | |
| 177 | V | A | 0.0000 | |
| 178 | L | A | 0.0000 | |
| 179 | Y | A | 0.0000 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.0000 | |
| 182 | I | A | 0.0000 | |
| 183 | G | A | 0.0000 | |
| 184 | F | A | 0.3841 | |
| 185 | P | A | 0.0082 | |
| 186 | H | A | 0.0000 | |
| 187 | G | A | 0.0000 | |
| 188 | D | A | -1.4052 | |
| 189 | E | A | 0.0000 | |
| 190 | V | A | 0.0000 | |
| 191 | E | A | 0.0000 | |
| 192 | E | A | -2.3625 | |
| 193 | A | A | -1.4101 | |
| 194 | F | A | 0.0000 | |
| 195 | K | A | -2.8919 | |
| 196 | D | A | -3.7367 | |
| 197 | T | A | -2.2749 | |
| 198 | D | A | -1.5868 | |
| 199 | R | A | -1.3188 | |
| 200 | V | A | 0.0000 | |
| 201 | M | A | 0.0000 | |
| 202 | T | A | 0.0000 | |
| 203 | V | A | 0.0000 | |
| 204 | S | A | 0.0000 | |
| 205 | F | A | 0.0000 | |
| 206 | H | A | 0.0000 | |
| 207 | K | A | -0.7181 | |
| 208 | V | A | -0.5476 | |
| 209 | G | A | -1.4608 | |
| 210 | D | A | -2.2652 | |
| 211 | T | A | -1.6536 | |
| 212 | G | A | 0.0000 | |
| 213 | D | A | -2.1039 | |
| 214 | I | A | -0.6139 | |
| 215 | S | A | -0.8131 | |
| 216 | D | A | -1.5268 | |
| 217 | Y | A | -0.7051 | |
| 218 | G | A | -2.3611 | |
| 219 | E | A | -3.4479 | |
| 220 | G | A | -2.9385 | |
| 221 | K | A | -3.1322 | |
| 222 | G | A | 0.0000 | |
| 223 | Q | A | -2.2264 | |
| 224 | Y | A | -0.6006 | |
| 225 | Y | A | 0.0000 | |
| 226 | S | A | 0.0000 | |
| 227 | L | A | 0.0000 | |
| 228 | N | A | 0.0000 | |
| 229 | A | A | 0.0000 | |
| 230 | P | A | -0.4324 | |
| 231 | L | A | 0.0000 | |
| 232 | K | A | -0.9141 | |
| 233 | D | A | -1.4372 | |
| 234 | G | A | 0.0000 | |
| 235 | L | A | 0.0000 | |
| 236 | D | A | -0.9087 | |
| 237 | D | A | -0.8170 | |
| 238 | F | A | 0.3275 | |
| 239 | S | A | 0.0000 | |
| 240 | L | A | 0.0000 | |
| 241 | R | A | -1.6146 | |
| 242 | G | A | -0.7269 | |
| 243 | L | A | 0.0000 | |
| 244 | F | A | 0.0000 | |
| 245 | I | A | -0.7305 | |
| 246 | P | A | -1.0106 | |
| 247 | V | A | 0.0000 | |
| 248 | I | A | 0.0000 | |
| 249 | H | A | -1.5342 | |
| 250 | R | A | -2.2371 | |
| 251 | A | A | 0.0000 | |
| 252 | M | A | -1.8624 | |
| 253 | E | A | -2.5411 | |
| 254 | I | A | -1.0508 | |
| 255 | Y | A | 0.0000 | |
| 256 | E | A | -2.4926 | |
| 257 | P | A | 0.0000 | |
| 258 | E | A | -1.7172 | |
| 259 | V | A | 0.0000 | |
| 260 | I | A | 0.0000 | |
| 261 | V | A | 0.0000 | |
| 262 | L | A | 0.0000 | |
| 263 | Q | A | 0.0000 | |
| 264 | C | A | 0.0000 | |
| 265 | G | A | 0.0000 | |
| 266 | A | A | 0.0000 | |
| 267 | D | A | 0.0000 | |
| 268 | S | A | 0.0000 | |
| 269 | L | A | 0.0000 | |
| 270 | A | A | 0.0000 | |
| 271 | G | A | -0.4339 | |
| 272 | D | A | 0.0000 | |
| 273 | P | A | 0.6255 | |
| 274 | F | A | 1.8193 | |
| 275 | G | A | 0.6303 | |
| 276 | T | A | -0.5883 | |
| 277 | F | A | 0.0000 | |
| 278 | N | A | 0.0000 | |
| 279 | L | A | 0.0000 | |
| 280 | S | A | 0.0000 | |
| 281 | I | A | 0.0000 | |
| 282 | K | A | -1.3567 | |
| 283 | G | A | 0.0000 | |
| 284 | H | A | 0.0000 | |
| 285 | G | A | 0.0000 | |
| 286 | D | A | -1.9638 | |
| 287 | C | A | 0.0000 | |
| 288 | L | A | 0.0000 | |
| 289 | Q | A | -1.1834 | |
| 290 | Y | A | -0.7011 | |
| 291 | V | A | 0.0000 | |
| 292 | R | A | -0.8294 | |
| 293 | S | A | -0.5536 | |
| 294 | F | A | -0.4909 | |
| 295 | N | A | -1.2986 | |
| 296 | V | A | -0.8340 | |
| 297 | P | A | -0.9332 | |
| 298 | L | A | 0.0000 | |
| 299 | M | A | 0.0000 | |
| 300 | I | A | 0.0000 | |
| 301 | L | A | 0.0000 | |
| 302 | G | A | 0.0000 | |
| 303 | G | A | 0.0000 | |
| 304 | G | A | 0.1967 | |
| 305 | G | A | 0.0000 | |
| 306 | Y | A | 0.6746 | |
| 307 | T | A | 0.3323 | |
| 308 | L | A | 0.3775 | |
| 309 | P | A | -0.1228 | |
| 310 | N | A | -0.0029 | |
| 311 | V | A | 0.0000 | |
| 312 | A | A | 0.0000 | |
| 313 | R | A | 0.0000 | |
| 314 | C | A | 0.0000 | |
| 315 | W | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | Y | A | -0.4977 | |
| 318 | E | A | 0.0000 | |
| 319 | T | A | 0.0000 | |
| 320 | A | A | 0.0000 | |
| 321 | I | A | 0.0000 | |
| 322 | A | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | G | A | -1.3476 | |
| 325 | E | A | -1.5591 | |
| 326 | Q | A | -1.9002 | |
| 327 | L | A | -1.8443 | |
| 328 | D | A | -2.9400 | |
| 329 | N | A | -2.4751 | |
| 330 | D | A | -3.0476 | |
| 331 | L | A | 0.0000 | |
| 332 | P | A | -1.0971 | |
| 333 | G | A | -1.0404 | |
| 334 | N | A | -1.3092 | |
| 335 | D | A | -2.0827 | |
| 336 | Y | A | -1.2412 | |
| 337 | M | A | -1.3503 | |
| 338 | K | A | -2.1277 | |
| 339 | Y | A | -0.9026 | |
| 340 | F | A | 0.0000 | |
| 341 | R | A | -2.8468 | |
| 342 | P | A | -2.3444 | |
| 343 | D | A | -2.6903 | |
| 344 | Y | A | -1.9854 | |
| 345 | K | A | -2.3616 | |
| 346 | L | A | 0.0000 | |
| 347 | H | A | -0.8599 | |
| 348 | I | A | 0.3508 | |
| 349 | L | A | 1.2641 | |
| 350 | P | A | -0.1322 | |
| 351 | T | A | -1.1978 | |
| 352 | N | A | -2.4116 | |
| 353 | R | A | -3.2406 | |
| 354 | Q | A | -2.5642 | |
| 355 | N | A | -1.7906 | |
| 356 | L | A | -0.7420 | |
| 357 | N | A | 0.0000 | |
| 358 | T | A | -0.4358 | |
| 359 | R | A | -0.8374 | |
| 360 | L | A | 0.6547 | |
| 361 | D | A | -0.0956 | |
| 362 | I | A | 0.0000 | |
| 363 | I | A | 0.1169 | |
| 364 | T | A | -0.3417 | |
| 365 | M | A | -0.2535 | |
| 366 | R | A | -0.8132 | |
| 367 | E | A | -1.6986 | |
| 368 | T | A | -0.7615 | |
| 369 | L | A | 0.0000 | |
| 370 | L | A | -0.6760 | |
| 371 | A | A | -0.1869 | |
| 372 | Q | A | 0.0000 | |
| 373 | L | A | 0.0000 | |
| 374 | S | A | 0.4750 | |
| 375 | L | A | 0.9313 | |
| 376 | V | A | 0.0000 | |
| 377 | M | A | 1.1565 | |
| 378 | H | A | -0.0684 | |
| 379 | A | A | -0.1303 | |
| 380 | P | A | -0.3542 | |
| 381 | S | A | 0.3100 | |
| 382 | V | A | 1.4045 | |
| 383 | P | A | 0.1513 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine