Project name: HTT_mutant_c14_mithramycin

Status: done

Started: 2026-03-28 01:02:56
Settings
Chain sequence(s) A: MATLEKLMKAFESLKSFQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPPPPPPPPPPPQLPQPPPQAQPLLPQPQPPPPPPPPPPGPAVAEEPLHRP
input PDB
Selected Chain(s) A
Distance of aggregation 5 Å
FoldX usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       runJob:   FoldX not utilized. Treating input pdb file as it was already optimized.    (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:00)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:01)
Show buried residues

Minimal score value
-1.3071
Maximal score value
1.739
Average score
-0.312
Total score value
-37.7568

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 1.0616
2 A A 0.1739
3 T A 0.0528
4 L A 0.5418
5 E A -0.4414
6 K A -0.3846
7 L A 0.4327
8 M A 0.2257
9 K A -0.3399
10 A A 0.0988
11 F A 0.4196
12 E A -0.5016
13 S A -0.1508
14 L A 0.3503
15 K A -0.3706
16 S A -0.1579
17 F A 0.3321
18 Q A -0.3344
19 Q A -0.4250
20 Q A -0.3603
21 Q A -0.4788
22 Q A -0.4318
23 Q A -0.4880
24 Q A -0.4716
25 Q A -0.3931
26 Q A -0.4982
27 Q A -0.4790
28 Q A -0.4123
29 Q A -0.4594
30 Q A -0.4434
31 Q A -0.4970
32 Q A -0.4558
33 Q A -0.4624
34 Q A -0.4543
35 Q A -0.4339
36 Q A -0.4425
37 Q A -0.4309
38 Q A -0.4890
39 Q A -0.4449
40 Q A -0.4330
41 Q A -0.5114
42 Q A -0.4470
43 Q A -0.4259
44 Q A -0.4826
45 Q A -0.4740
46 Q A -0.4293
47 Q A -0.4697
48 Q A -0.4787
49 Q A -0.4536
50 Q A -0.4483
51 Q A -0.4789
52 Q A -0.4683
53 Q A -0.4251
54 Q A -0.4808
55 Q A -0.4655
56 Q A -0.4395
57 Q A -0.4832
58 Q A -0.4361
59 Q A -0.4629
60 Q A -0.4145
61 Q A -0.4844
62 Q A -0.4736
63 Q A -0.4000
64 Q A -0.4404
65 Q A -0.5227
66 Q A -0.4789
67 Q A -0.4733
68 Q A -0.5153
69 Q A -0.6943
70 Q A -0.6209
71 Q A -0.4644
72 P A -0.3639
73 P A -0.3476
74 P A -0.3456
75 P A -0.3469
76 P A -0.3458
77 P A -0.3428
78 P A -0.3439
79 P A -0.3460
80 P A -0.3468
81 P A -0.3281
82 P A -0.3717
83 Q A -0.9214
84 L A 0.3471
85 P A -0.2806
86 Q A -0.8014
87 P A -0.4246
88 P A -0.3447
89 P A -0.3932
90 Q A -0.5348
91 A A -0.1061
92 Q A -0.4718
93 P A -0.1858
94 L A 0.9656
95 L A 0.9453
96 P A -0.2329
97 Q A -0.7883
98 P A -0.4959
99 Q A -0.7766
100 P A -0.4227
101 P A -0.3483
102 P A -0.3491
103 P A -0.3489
104 P A -0.3497
105 P A -0.3472
106 P A -0.3451
107 P A -0.3444
108 P A -0.3376
109 P A -0.3799
110 G A -0.5564
111 P A -0.3289
112 A A 0.3301
113 V A 1.7390
114 A A 0.1762
115 E A -1.1445
116 E A -1.3071
117 P A -0.3016
118 L A 0.6601
119 H A -0.5524
120 R A -0.6179
121 P A -0.3313
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Laboratory of Theory of Biopolymers 2018