| Chain sequence(s) |
L: KEIIVDAFTPHPPD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:13)
[INFO] Main: Simulation completed successfully. (00:00:13)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 44 | K | L | -2.0308 | |
| 45 | E | L | -1.7595 | |
| 46 | I | L | 2.0412 | |
| 47 | I | L | 2.6915 | |
| 48 | V | L | 1.8186 | |
| 49 | D | L | -1.4686 | |
| 50 | A | L | 0.0891 | |
| 51 | F | L | 1.9389 | |
| 52 | T | L | 0.2524 | |
| 53 | P | L | -0.3475 | |
| 54 | H | L | -1.0626 | |
| 55 | P | L | -0.4720 | |
| 56 | P | L | -0.6200 | |
| 57 | D | L | -1.8350 |