Project name: F4F4

Status: done

Started: 2025-06-25 14:02:42
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Chain sequence(s) H: EVQLLESGGGLVQPGGSLRLSCAASGFTFSSSQMSWFRQAPGKEREFVSAVTLVSRTHYADSVKGRFTISRDDSKNTLYLQMNSLRPEDTAMYYCVARAAWGTDYREQGYWGQGTQVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:49)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:50)
Show buried residues

Minimal score value
-3.4189
Maximal score value
1.2878
Average score
-0.7537
Total score value
-91.2032

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.9427
2 V H -0.8876
3 Q H -0.9548
4 L H 0.0000
5 L H 0.6478
6 E H -0.1363
7 S H -0.5347
8 G H -0.8687
9 G H -0.5573
11 G H 0.2046
12 L H 1.1275
13 V H 0.0012
14 Q H -1.2889
15 P H -1.6542
16 G H -1.3747
17 G H -1.0706
18 S H -0.8767
19 L H -0.4248
20 R H -1.0618
21 L H 0.0000
22 S H -0.1952
23 C H 0.0000
24 A H -0.2057
25 A H 0.0000
26 S H -0.8751
27 G H -1.0436
28 F H -0.3461
29 T H -0.5533
30 F H 0.0000
35 S H -0.7004
36 S H -0.0597
37 S H 0.0000
38 Q H -0.1894
39 M H 0.0000
40 S H 0.0000
41 W H 0.0000
42 F H 0.6850
43 R H 0.0000
44 Q H -1.4979
45 A H -1.6697
46 P H -1.2485
47 G H -1.7006
48 K H -2.7607
49 E H -2.9865
50 R H -1.9265
51 E H -0.8231
52 F H 0.9092
53 V H 0.0000
54 S H 0.0000
55 A H -0.3173
56 V H 0.0000
57 T H -0.1883
58 L H 0.7545
59 V H 1.2878
63 S H -0.3017
64 R H -1.5804
65 T H -1.1525
66 H H -1.5711
67 Y H -0.9946
68 A H -1.0338
69 D H -2.5251
70 S H -1.7643
71 V H 0.0000
72 K H -2.5644
74 G H -1.6766
75 R H -1.5416
76 F H 0.0000
77 T H -0.7493
78 I H 0.0000
79 S H -0.2947
80 R H -1.1614
81 D H -1.8387
82 D H -2.2518
83 S H -1.8813
84 K H -2.5931
85 N H -1.9811
86 T H -1.1456
87 L H 0.0000
88 Y H -0.1773
89 L H 0.0000
90 Q H -0.6807
91 M H 0.0000
92 N H -1.2003
93 S H -1.2226
94 L H 0.0000
95 R H -2.2614
96 P H -1.8542
97 E H -2.3257
98 D H 0.0000
99 T H -0.8238
100 A H 0.0000
101 M H -0.4476
102 Y H 0.0000
103 Y H 0.1721
104 C H 0.0000
105 V H 0.1692
106 A H 0.0000
107 R H -1.0671
108 A H -0.6567
109 A H -0.4104
110 W H 0.2649
111 G H -0.7495
111A T H -0.9835
112A D H -2.3834
112 Y H -1.9599
113 R H -3.4189
114 E H -3.2783
115 Q H -2.2045
116 G H -1.4170
117 Y H -0.1558
118 W H 0.4390
119 G H -0.0529
120 Q H -0.9121
121 G H -0.5012
122 T H -0.7190
123 Q H -0.7887
124 V H 0.0000
125 T H -0.2356
126 V H 0.0000
127 S H -0.6405
128 S H -0.8129
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Laboratory of Theory of Biopolymers 2018