| Chain sequence(s) |
H: EVQLVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKRLEWVATISSGGSYIYYSDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCARDLLLYYTMDNWGQGTSVTVSS
L: DIQMNQSPSSLSASLGDTITITCHASQKINVWLSWYQQKPGNIPKLLIYKASNLHTGVPSRFSGSGSGTGFTLTISSLQPEDIATYYCQQGQSYPWTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:21)
[INFO] Main: Simulation completed successfully. (00:01:23)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.9553 | |
| 2 | V | H | -1.0226 | |
| 3 | Q | H | -0.9192 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.2503 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.4737 | |
| 8 | G | H | -1.2648 | |
| 9 | G | H | -1.1694 | |
| 11 | D | H | -1.5508 | |
| 12 | L | H | 0.2514 | |
| 13 | V | H | -0.8485 | |
| 14 | K | H | -2.1210 | |
| 15 | P | H | -1.9824 | |
| 16 | G | H | -1.6153 | |
| 17 | G | H | -1.1483 | |
| 18 | S | H | -1.0955 | |
| 19 | L | H | -1.2387 | |
| 20 | K | H | -2.0245 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.2978 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | 0.0292 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.6383 | |
| 27 | G | H | -1.1056 | |
| 28 | F | H | -0.4543 | |
| 29 | T | H | -0.2118 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -0.7698 | |
| 36 | S | H | 0.0246 | |
| 37 | Y | H | 0.6903 | |
| 38 | G | H | 0.0000 | |
| 39 | M | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | 0.0000 | |
| 45 | T | H | -1.9538 | |
| 46 | P | H | -1.7608 | |
| 47 | D | H | -2.9568 | |
| 48 | K | H | -2.9839 | |
| 49 | R | H | -3.1374 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.9528 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | T | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | S | H | 0.0000 | |
| 58 | S | H | 0.0660 | |
| 59 | G | H | -0.5289 | |
| 62 | G | H | -0.0206 | |
| 63 | S | H | 0.4460 | |
| 64 | Y | H | 1.6791 | |
| 65 | I | H | 1.8185 | |
| 66 | Y | H | 1.0840 | |
| 67 | Y | H | -0.3420 | |
| 68 | S | H | -1.1994 | |
| 69 | D | H | -2.6280 | |
| 70 | S | H | -1.7792 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.5440 | |
| 74 | G | H | -1.7350 | |
| 75 | R | H | -1.5042 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.6902 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.2937 | |
| 80 | R | H | -0.9130 | |
| 81 | D | H | -1.3824 | |
| 82 | N | H | -1.6127 | |
| 83 | A | H | -1.3183 | |
| 84 | K | H | -2.2275 | |
| 85 | N | H | -1.6775 | |
| 86 | T | H | -0.8835 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.4847 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.3816 | |
| 91 | M | H | 0.0000 | |
| 92 | S | H | -1.1191 | |
| 93 | S | H | -1.2733 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -2.7643 | |
| 96 | S | H | -2.2065 | |
| 97 | E | H | -2.4911 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.8136 | |
| 100 | A | H | 0.0000 | |
| 101 | M | H | -0.1991 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | D | H | 0.0000 | |
| 108 | L | H | 1.5838 | |
| 109 | L | H | 2.5875 | |
| 110 | L | H | 2.3812 | |
| 112 | Y | H | 2.2482 | |
| 113 | Y | H | 1.3918 | |
| 114 | T | H | 0.0000 | |
| 115 | M | H | 0.0000 | |
| 116 | D | H | 0.0000 | |
| 117 | N | H | -0.3914 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -0.9423 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | 0.0000 | |
| 123 | S | H | -0.5527 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.6704 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.8463 | |
| 128 | S | H | -0.7555 | |
| 1 | D | L | -2.3361 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.1823 | |
| 4 | M | L | 0.0000 | |
| 5 | N | L | -1.5405 | |
| 6 | Q | L | -0.9856 | |
| 7 | S | L | -0.7329 | |
| 8 | P | L | -0.6354 | |
| 9 | S | L | -0.8116 | |
| 10 | S | L | -0.8494 | |
| 11 | L | L | -0.5569 | |
| 12 | S | L | -0.6632 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.5556 | |
| 15 | L | L | 0.2044 | |
| 16 | G | L | -0.5035 | |
| 17 | D | L | -0.8997 | |
| 18 | T | L | -0.6301 | |
| 19 | I | L | 0.0000 | |
| 20 | T | L | -0.2199 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.6162 | |
| 23 | C | L | 0.0000 | |
| 24 | H | L | -1.9609 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.9169 | |
| 27 | Q | L | -2.3871 | |
| 28 | K | L | -2.5098 | |
| 29 | I | L | 0.0000 | |
| 36 | N | L | -1.4060 | |
| 37 | V | L | -0.4942 | |
| 38 | W | L | -0.1839 | |
| 39 | L | L | 0.0000 | |
| 40 | S | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.3410 | |
| 46 | P | L | -0.9169 | |
| 47 | G | L | -1.3348 | |
| 48 | N | L | -1.7618 | |
| 49 | I | L | -0.7343 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -0.8769 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.3456 | |
| 56 | K | L | -0.8920 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.8552 | |
| 66 | N | L | -1.1473 | |
| 67 | L | L | -0.3414 | |
| 68 | H | L | -0.3160 | |
| 69 | T | L | -0.3284 | |
| 70 | G | L | -0.4292 | |
| 71 | V | L | -0.2434 | |
| 72 | P | L | -0.3242 | |
| 74 | S | L | -0.4210 | |
| 75 | R | L | -0.6367 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.4971 | |
| 78 | G | L | -0.5810 | |
| 79 | S | L | -0.7178 | |
| 80 | G | L | -0.7753 | |
| 83 | S | L | -1.0370 | |
| 84 | G | L | -1.4093 | |
| 85 | T | L | -1.5441 | |
| 86 | G | L | -1.3388 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.5049 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.2607 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -0.7551 | |
| 93 | S | L | -0.6807 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.7096 | |
| 96 | P | L | -0.6409 | |
| 97 | E | L | -1.3436 | |
| 98 | D | L | 0.0000 | |
| 99 | I | L | -0.2178 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | 0.0000 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | G | L | 0.1277 | |
| 108 | Q | L | -0.4904 | |
| 109 | S | L | -0.2176 | |
| 114 | Y | L | 0.0672 | |
| 115 | P | L | -0.5522 | |
| 116 | W | L | 0.0000 | |
| 117 | T | L | -0.7391 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -1.6111 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.3235 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -0.8429 | |
| 126 | I | L | -0.4305 | |
| 127 | K | L | -1.3572 |