Project name: 2.F9G8_A3D

Status: done

Started: 2026-07-07 07:21:25
Settings
Chain sequence(s) H: EVQLVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKRLEWVATISSGGSYIYYSDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCARDLLLYYTMDNWGQGTSVTVSS
L: DIQMNQSPSSLSASLGDTITITCHASQKINVWLSWYQQKPGNIPKLLIYKASNLHTGVPSRFSGSGSGTGFTLTISSLQPEDIATYYCQQGQSYPWTFGGGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:21)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:23)
Show buried residues

Minimal score value
-3.1374
Maximal score value
2.5875
Average score
-0.5279
Total score value
-119.2959

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.9553
2 V H -1.0226
3 Q H -0.9192
4 L H 0.0000
5 V H 1.2503
6 E H 0.0000
7 S H -0.4737
8 G H -1.2648
9 G H -1.1694
11 D H -1.5508
12 L H 0.2514
13 V H -0.8485
14 K H -2.1210
15 P H -1.9824
16 G H -1.6153
17 G H -1.1483
18 S H -1.0955
19 L H -1.2387
20 K H -2.0245
21 L H 0.0000
22 S H -0.2978
23 C H 0.0000
24 A H 0.0292
25 A H 0.0000
26 S H -0.6383
27 G H -1.1056
28 F H -0.4543
29 T H -0.2118
30 F H 0.0000
35 S H -0.7698
36 S H 0.0246
37 Y H 0.6903
38 G H 0.0000
39 M H 0.0000
40 S H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H 0.0000
45 T H -1.9538
46 P H -1.7608
47 D H -2.9568
48 K H -2.9839
49 R H -3.1374
50 L H 0.0000
51 E H -0.9528
52 W H 0.0000
53 V H 0.0000
54 A H 0.0000
55 T H 0.0000
56 I H 0.0000
57 S H 0.0000
58 S H 0.0660
59 G H -0.5289
62 G H -0.0206
63 S H 0.4460
64 Y H 1.6791
65 I H 1.8185
66 Y H 1.0840
67 Y H -0.3420
68 S H -1.1994
69 D H -2.6280
70 S H -1.7792
71 V H 0.0000
72 K H -2.5440
74 G H -1.7350
75 R H -1.5042
76 F H 0.0000
77 T H -0.6902
78 I H 0.0000
79 S H -0.2937
80 R H -0.9130
81 D H -1.3824
82 N H -1.6127
83 A H -1.3183
84 K H -2.2275
85 N H -1.6775
86 T H -0.8835
87 L H 0.0000
88 Y H -0.4847
89 L H 0.0000
90 Q H -1.3816
91 M H 0.0000
92 S H -1.1191
93 S H -1.2733
94 L H 0.0000
95 K H -2.7643
96 S H -2.2065
97 E H -2.4911
98 D H 0.0000
99 T H -0.8136
100 A H 0.0000
101 M H -0.1991
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 D H 0.0000
108 L H 1.5838
109 L H 2.5875
110 L H 2.3812
112 Y H 2.2482
113 Y H 1.3918
114 T H 0.0000
115 M H 0.0000
116 D H 0.0000
117 N H -0.3914
118 W H 0.0000
119 G H 0.0000
120 Q H -0.9423
121 G H 0.0000
122 T H 0.0000
123 S H -0.5527
124 V H 0.0000
125 T H -0.6704
126 V H 0.0000
127 S H -0.8463
128 S H -0.7555
1 D L -2.3361
2 I L 0.0000
3 Q L -2.1823
4 M L 0.0000
5 N L -1.5405
6 Q L -0.9856
7 S L -0.7329
8 P L -0.6354
9 S L -0.8116
10 S L -0.8494
11 L L -0.5569
12 S L -0.6632
13 A L 0.0000
14 S L -0.5556
15 L L 0.2044
16 G L -0.5035
17 D L -0.8997
18 T L -0.6301
19 I L 0.0000
20 T L -0.2199
21 I L 0.0000
22 T L -0.6162
23 C L 0.0000
24 H L -1.9609
25 A L 0.0000
26 S L -1.9169
27 Q L -2.3871
28 K L -2.5098
29 I L 0.0000
36 N L -1.4060
37 V L -0.4942
38 W L -0.1839
39 L L 0.0000
40 S L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L 0.0000
45 K L -1.3410
46 P L -0.9169
47 G L -1.3348
48 N L -1.7618
49 I L -0.7343
50 P L 0.0000
51 K L -0.8769
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L -0.3456
56 K L -0.8920
57 A L 0.0000
65 S L -0.8552
66 N L -1.1473
67 L L -0.3414
68 H L -0.3160
69 T L -0.3284
70 G L -0.4292
71 V L -0.2434
72 P L -0.3242
74 S L -0.4210
75 R L -0.6367
76 F L 0.0000
77 S L -0.4971
78 G L -0.5810
79 S L -0.7178
80 G L -0.7753
83 S L -1.0370
84 G L -1.4093
85 T L -1.5441
86 G L -1.3388
87 F L 0.0000
88 T L -0.5049
89 L L 0.0000
90 T L -0.2607
91 I L 0.0000
92 S L -0.7551
93 S L -0.6807
94 L L 0.0000
95 Q L -0.7096
96 P L -0.6409
97 E L -1.3436
98 D L 0.0000
99 I L -0.2178
100 A L 0.0000
101 T L 0.0000
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 G L 0.1277
108 Q L -0.4904
109 S L -0.2176
114 Y L 0.0672
115 P L -0.5522
116 W L 0.0000
117 T L -0.7391
118 F L 0.0000
119 G L 0.0000
120 G L -1.6111
121 G L 0.0000
122 T L 0.0000
123 K L -1.3235
124 L L 0.0000
125 E L -0.8429
126 I L -0.4305
127 K L -1.3572
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Laboratory of Theory of Biopolymers 2018