Project name: query_structure

Status: done

Started: 2026-03-16 23:24:33
Settings
Chain sequence(s) A: GIPCGESCVWIPCISSALGCSCKNKVCYRN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:35)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:36)
Show buried residues

Minimal score value
-2.4871
Maximal score value
2.7973
Average score
0.1264
Total score value
3.7929

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.5713
2 I A 1.0206
3 P A 0.1311
4 C A 0.4657
5 G A -0.1032
6 E A 0.2347
7 S A 0.2828
8 C A 0.8219
9 V A 1.2720
10 W A 2.2352
11 I A 2.7973
12 P A 1.6338
13 C A 0.0000
14 I A 2.3380
15 S A 1.1858
16 S A 0.7824
17 A A 1.0793
18 L A 1.4808
19 G A 0.0550
20 C A 0.0000
21 S A -0.8384
22 C A -0.9173
23 K A -2.4871
24 N A -2.4232
25 K A -1.7788
26 V A -1.1620
27 C A 0.0000
28 Y A -0.8994
29 R A -1.2096
30 N A -1.6332
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Laboratory of Theory of Biopolymers 2018