Chain sequence(s) |
A: SWSEFPDTQTWLLIYWNKW
C: SWSEFPDTQTWLLIYWNKW B: SWSEFPDTQTWLLIYWNKW E: SWSEFPDTQTWLLIYWNKW D: SWSEFPDTQTWLLIYWNKW F: SWSEFPDTQTWLLIYWNKW input PDB |
Selected Chain(s) | A,B,C,D,E,F |
Distance of aggregation | 5 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | WF19E,IF14D,WF16A,YF15B,LF13F,NF17C |
Energy difference between WT (input) and mutated protein (by FoldX) | 3.07964 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:03:07) [INFO] FoldX: Starting FoldX energy minimalization (00:04:35) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:39) [INFO] Main: Simulation completed successfully. (00:05:41) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | S | A | 0.0106 | |
2 | W | A | 1.1279 | |
3 | S | A | -0.1853 | |
4 | E | A | -2.0528 | |
5 | F | A | -0.1384 | |
6 | P | A | -0.0049 | |
7 | D | A | -0.8675 | |
8 | T | A | -0.3040 | |
9 | Q | A | -0.4001 | |
10 | T | A | -0.0575 | |
11 | W | A | 0.2717 | |
12 | L | A | 0.3947 | |
13 | L | A | 0.3694 | |
14 | I | A | 0.0000 | |
15 | Y | A | 1.3153 | |
16 | F | A | 0.0000 | mutated: WF16A |
17 | N | A | -0.9948 | |
18 | K | A | -1.6027 | |
19 | W | A | 0.8655 | |
1 | S | B | 0.0098 | |
2 | W | B | 1.1278 | |
3 | S | B | -0.1834 | |
4 | E | B | -2.0925 | |
5 | F | B | 0.0000 | |
6 | P | B | -0.0955 | |
7 | D | B | -1.2080 | |
8 | T | B | -0.3898 | |
9 | Q | B | -0.4931 | |
10 | T | B | -0.0720 | |
11 | W | B | 0.1706 | |
12 | L | B | 0.0000 | |
13 | L | B | 0.4793 | |
14 | I | B | 0.0000 | |
15 | F | B | 0.7964 | mutated: YF15B |
16 | W | B | 0.0000 | |
17 | N | B | -1.5943 | |
18 | K | B | -1.7129 | |
19 | W | B | 0.8610 | |
1 | S | C | 0.0110 | |
2 | W | C | 1.1286 | |
3 | S | C | -0.1761 | |
4 | E | C | -2.1257 | |
5 | F | C | 0.0000 | |
6 | P | C | -0.0772 | |
7 | D | C | -1.1208 | |
8 | T | C | -0.3331 | |
9 | Q | C | -0.2990 | |
10 | T | C | -0.0344 | |
11 | W | C | 0.1938 | |
12 | L | C | 0.0000 | |
13 | L | C | 0.4843 | |
14 | I | C | 0.0000 | |
15 | Y | C | 0.4738 | |
16 | W | C | 0.3911 | |
17 | F | C | 0.6264 | mutated: NF17C |
18 | K | C | -1.2965 | |
19 | W | C | 0.8623 | |
1 | S | D | 0.0114 | |
2 | W | D | 1.1268 | |
3 | S | D | -0.3547 | |
4 | E | D | -2.1195 | |
5 | F | D | 0.0000 | |
6 | P | D | -0.0470 | |
7 | D | D | -0.9362 | |
8 | T | D | -0.3049 | |
9 | Q | D | -0.3408 | |
10 | T | D | -0.0736 | |
11 | W | D | 0.1896 | |
12 | L | D | 0.0000 | |
13 | L | D | 0.4793 | |
14 | F | D | 0.0000 | mutated: IF14D |
15 | Y | D | 1.3153 | |
16 | W | D | 0.0000 | |
17 | N | D | -1.5920 | |
18 | K | D | -1.7109 | |
19 | W | D | 0.8605 | |
1 | S | E | 0.0131 | |
2 | W | E | 1.1281 | |
3 | S | E | -0.1777 | |
4 | E | E | -2.0387 | |
5 | F | E | -0.1375 | |
6 | P | E | -0.0268 | |
7 | D | E | -0.9619 | |
8 | T | E | -0.3333 | |
9 | Q | E | -0.4670 | |
10 | T | E | -0.0732 | |
11 | W | E | 0.2182 | |
12 | L | E | 0.0000 | |
13 | L | E | 0.3452 | |
14 | I | E | 0.0000 | |
15 | Y | E | 1.3153 | |
16 | W | E | 0.0000 | |
17 | N | E | -1.5273 | |
18 | K | E | -1.2089 | |
19 | F | E | 1.6855 | mutated: WF19E |
1 | S | F | 0.0125 | |
2 | W | F | 1.1264 | |
3 | S | F | -0.1863 | |
4 | E | F | -2.0795 | |
5 | F | F | 0.0000 | |
6 | P | F | -0.1068 | |
7 | D | F | -1.2027 | |
8 | T | F | -0.3950 | |
9 | Q | F | -0.5348 | |
10 | T | F | -0.0853 | |
11 | W | F | 0.1835 | |
12 | L | F | 0.5730 | |
13 | F | F | 1.9750 | mutated: LF13F |
14 | I | F | 0.0000 | |
15 | Y | F | 0.7338 | |
16 | W | F | 0.0000 | |
17 | N | F | -1.5525 | |
18 | K | F | -1.4725 | |
19 | W | F | 0.9099 |