| Chain sequence(s) |
A: GGGGSGGGGSGGGGS
C: GGGGSGGGGSGGGGS B: GGGGSGGGGSGGGGS D: GGGGSGGGGSGGGGS input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.9703 | |
| 2 | G | A | -1.3703 | |
| 3 | G | A | -1.4518 | |
| 4 | G | A | -1.6769 | |
| 5 | S | A | -1.3915 | |
| 6 | G | A | -1.3420 | |
| 7 | G | A | -1.4668 | |
| 8 | G | A | -1.4895 | |
| 9 | G | A | -1.3891 | |
| 10 | S | A | -1.4103 | |
| 11 | G | A | -1.4318 | |
| 12 | G | A | -1.5496 | |
| 13 | G | A | -1.6525 | |
| 14 | G | A | -1.7028 | |
| 15 | S | A | -1.2231 | |
| 1 | G | B | -1.2725 | |
| 2 | G | B | -1.2805 | |
| 3 | G | B | -1.4964 | |
| 4 | G | B | -1.3703 | |
| 5 | S | B | -1.4665 | |
| 6 | G | B | -1.3989 | |
| 7 | G | B | -1.4463 | |
| 8 | G | B | -1.4540 | |
| 9 | G | B | -1.3997 | |
| 10 | S | B | -1.5144 | |
| 11 | G | B | -1.6744 | |
| 12 | G | B | -1.7348 | |
| 13 | G | B | -1.6605 | |
| 14 | G | B | 0.0000 | |
| 15 | S | B | -0.9099 | |
| 1 | G | C | -0.9799 | |
| 2 | G | C | -1.0375 | |
| 3 | G | C | -1.1470 | |
| 4 | G | C | -1.1316 | |
| 5 | S | C | -1.3214 | |
| 6 | G | C | -1.3911 | |
| 7 | G | C | -1.3728 | |
| 8 | G | C | -1.5009 | |
| 9 | G | C | -1.5358 | |
| 10 | S | C | -1.4504 | |
| 11 | G | C | -1.5716 | |
| 12 | G | C | -1.6292 | |
| 13 | G | C | -1.7127 | |
| 14 | G | C | -1.4278 | |
| 15 | S | C | -0.9126 | |
| 1 | G | D | -1.5042 | |
| 2 | G | D | -1.6462 | |
| 3 | G | D | -1.7109 | |
| 4 | G | D | -1.4842 | |
| 5 | S | D | -1.4536 | |
| 6 | G | D | -1.4585 | |
| 7 | G | D | -1.5761 | |
| 8 | G | D | -1.4706 | |
| 9 | G | D | -1.5671 | |
| 10 | S | D | -1.2718 | |
| 11 | G | D | -1.5504 | |
| 12 | G | D | -1.5665 | |
| 13 | G | D | -1.5430 | |
| 14 | G | D | -1.2451 | |
| 15 | S | D | -0.7404 |