Project name: LC1_2_AR37A

Status: done

Started: 2026-07-29 12:36:35
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Chain sequence(s) A: SEAKERASDLKAEAAARALAIIDAARAAVAAADPALRPLALAASGEAASAIALGMQEGLEVGVERVREVAERAPPAMAAALREAARLLEEAGRRVEELL
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:40)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:41)
Show buried residues

Minimal score value
-4.8907
Maximal score value
0.6209
Average score
-1.3959
Total score value
-138.1951

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 S A -2.2325
2 E A -3.4962
3 A A -2.7700
4 K A -3.6558
5 E A -4.7969
6 R A -4.2297
7 A A 0.0000
8 S A -3.2457
9 D A -3.8578
10 L A 0.0000
11 K A -2.5201
12 A A -2.0029
13 E A -2.7289
14 A A 0.0000
15 A A 0.0000
16 A A -1.0722
17 R A -1.8698
18 A A 0.0000
19 L A -0.1504
20 A A -0.4302
21 I A -0.2007
22 I A 0.0000
23 D A -1.1249
24 A A -0.4059
25 A A -0.2483
26 R A -0.5648
27 A A -0.4577
28 A A -0.4953
29 V A 0.0000
30 A A -0.5308
31 A A -0.4093
32 A A -0.5485
33 D A -1.1425
34 P A -0.8530
35 A A -0.3965
36 L A -0.1117
37 R A -0.7229
38 P A 0.1389
39 L A 0.6209
40 A A 0.0000
41 L A 0.4259
42 A A 0.0156
43 A A 0.0000
44 S A 0.0000
45 G A -1.1167
46 E A -2.2957
47 A A 0.0000
48 A A -0.7334
49 S A -1.0031
50 A A 0.0000
51 I A 0.0000
52 A A -0.4480
53 L A -0.8265
54 G A 0.0000
55 M A -0.9409
56 Q A -1.7867
57 E A -2.4126
58 G A -1.5987
59 L A 0.0000
60 E A -3.2527
61 V A -1.9551
62 G A 0.0000
63 V A 0.0000
64 E A -3.9349
65 R A -3.8203
66 V A 0.0000
67 R A -4.7077
68 E A -4.6976
69 V A -3.5417
70 A A 0.0000
71 E A -3.7995
72 R A -3.1096
73 A A -1.3802
74 P A 0.0000
75 P A -0.6912
76 A A -0.1208
77 M A 0.0000
78 A A -1.7139
79 A A -1.0125
80 A A 0.0000
81 L A 0.0000
82 R A -3.3070
83 E A -2.2776
84 A A 0.0000
85 A A 0.0000
86 R A -3.5702
87 L A -2.6328
88 L A 0.0000
89 E A -4.3282
90 E A -4.2595
91 A A 0.0000
92 G A -3.8921
93 R A -4.8907
94 R A -4.2269
95 V A 0.0000
96 E A -3.3553
97 E A -2.9791
98 L A -1.4542
99 L A -0.0509
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Laboratory of Theory of Biopolymers 2018