Chain sequence(s) |
A: QVQLVESGGALVQPGGSLRLTCKPLGANFDTYAVAWFRQAPGKERVGSMLNKGDEDKYYSDAVKGRFTISWNDAKNMVFLEMTDLMADDTGVYYCAGGWFAPLIAAVTYGSPFEYANWGQGTQVTVS
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:20) [INFO] Main: Simulation completed successfully. (00:01:20) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | A | -1.3810 | |
2 | V | A | -0.9407 | |
3 | Q | A | -1.3309 | |
4 | L | A | 0.0000 | |
5 | V | A | -0.1869 | |
6 | E | A | -0.6298 | |
7 | S | A | -0.9092 | |
8 | G | A | -1.0098 | |
9 | G | A | -0.6464 | |
10 | A | A | 0.1019 | |
11 | L | A | 1.1306 | |
12 | V | A | 0.1975 | |
13 | Q | A | -1.2719 | |
14 | P | A | -1.3741 | |
15 | G | A | -1.6809 | |
16 | G | A | -1.1566 | |
17 | S | A | -1.4417 | |
18 | L | A | -1.0499 | |
19 | R | A | -2.0609 | |
20 | L | A | 0.0000 | |
21 | T | A | -0.7556 | |
22 | C | A | 0.0000 | |
23 | K | A | -1.0383 | |
24 | P | A | 0.0000 | |
25 | L | A | -0.2354 | |
26 | G | A | -0.7984 | |
27 | A | A | -1.1941 | |
28 | N | A | -2.0452 | |
29 | F | A | 0.0000 | |
30 | D | A | -2.5718 | |
31 | T | A | -0.8626 | |
32 | Y | A | -0.0392 | |
33 | A | A | 0.0000 | |
34 | V | A | 0.0000 | |
35 | A | A | 0.0000 | |
36 | W | A | 0.0000 | |
37 | F | A | 0.0000 | |
38 | R | A | 0.0000 | |
39 | Q | A | -1.3927 | |
40 | A | A | -1.5847 | |
41 | P | A | -1.3683 | |
42 | G | A | -1.9412 | |
43 | K | A | -2.9728 | |
44 | E | A | -2.9316 | |
45 | R | A | -1.6337 | |
46 | V | A | 0.2628 | |
47 | G | A | 0.5534 | |
48 | S | A | 0.0000 | |
49 | M | A | 0.0000 | |
50 | L | A | 0.0000 | |
51 | N | A | 0.0000 | |
52 | K | A | -2.1316 | |
53 | G | A | -2.8072 | |
54 | D | A | -3.3030 | |
55 | E | A | -3.4753 | |
56 | D | A | -2.6115 | |
57 | K | A | -1.7816 | |
58 | Y | A | -0.2765 | |
59 | Y | A | -0.6301 | |
60 | S | A | -0.8853 | |
61 | D | A | -2.2891 | |
62 | A | A | -1.5298 | |
63 | V | A | 0.0000 | |
64 | K | A | -2.4456 | |
65 | G | A | -1.8224 | |
66 | R | A | -1.6358 | |
67 | F | A | 0.0000 | |
68 | T | A | -1.0133 | |
69 | I | A | 0.0000 | |
70 | S | A | -0.9429 | |
71 | W | A | -1.2074 | |
72 | N | A | -1.7034 | |
73 | D | A | -2.9613 | |
74 | A | A | -1.7547 | |
75 | K | A | -2.4963 | |
76 | N | A | -2.3519 | |
77 | M | A | -1.3526 | |
78 | V | A | 0.0000 | |
79 | F | A | 0.0000 | |
80 | L | A | 0.0000 | |
81 | E | A | -1.7370 | |
82 | M | A | 0.0000 | |
83 | T | A | -1.6638 | |
84 | D | A | -2.2883 | |
85 | L | A | 0.0000 | |
86 | M | A | -0.9951 | |
87 | A | A | -0.9123 | |
88 | D | A | -1.6627 | |
89 | D | A | 0.0000 | |
90 | T | A | -0.5140 | |
91 | G | A | 0.0000 | |
92 | V | A | -0.4296 | |
93 | Y | A | 0.0000 | |
94 | Y | A | -0.3328 | |
95 | C | A | 0.0000 | |
96 | A | A | 0.0000 | |
97 | G | A | 0.0000 | |
98 | G | A | 0.0000 | |
99 | W | A | 1.6524 | |
100 | F | A | 0.9355 | |
101 | A | A | 0.6144 | |
102 | P | A | 0.5124 | |
103 | L | A | 0.0000 | |
104 | I | A | 0.8198 | |
105 | A | A | 0.5253 | |
106 | A | A | 0.0000 | |
107 | V | A | 0.8847 | |
108 | T | A | 0.7494 | |
109 | Y | A | 1.1046 | |
110 | G | A | 0.3452 | |
111 | S | A | -0.1310 | |
112 | P | A | -0.4328 | |
113 | F | A | -0.4551 | |
114 | E | A | -1.1732 | |
115 | Y | A | 0.6826 | |
116 | A | A | 0.5362 | |
117 | N | A | -0.2593 | |
118 | W | A | -0.1001 | |
119 | G | A | -0.7537 | |
120 | Q | A | -1.1959 | |
121 | G | A | -0.7595 | |
122 | T | A | -0.8298 | |
123 | Q | A | -0.9392 | |
124 | V | A | 0.0000 | |
125 | T | A | -0.0069 | |
126 | V | A | 0.0000 | |
127 | S | A | -0.4768 |