| Chain sequence(s) |
A: MSHHHHHHSGMKVVLELKDSYPSSSDLPKKKVVFDVKPISEMSGEEFAEKMKKILDFIYEVMSTDPRMTEKDLEKLKKQIDYYKEDIEKRAKTGKVEEMNAAAREVYNFAEQMMWDASYRGHSISVDKFYDIMAVVDKYLETPENDLNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:28)
[INFO] Main: Simulation completed successfully. (00:06:29)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5581 | |
| 2 | S | A | -0.6199 | |
| 3 | H | A | -1.7414 | |
| 4 | H | A | -2.3411 | |
| 5 | H | A | -2.7425 | |
| 6 | H | A | -2.7441 | |
| 7 | H | A | -2.5170 | |
| 8 | H | A | -2.1281 | |
| 9 | S | A | -1.6497 | |
| 10 | G | A | -1.6287 | |
| 11 | M | A | -1.1718 | |
| 12 | K | A | -1.6461 | |
| 13 | V | A | -0.3755 | |
| 14 | V | A | 0.1739 | |
| 15 | L | A | 0.0000 | |
| 16 | E | A | -2.1957 | |
| 17 | L | A | 0.0000 | |
| 18 | K | A | -2.1052 | |
| 19 | D | A | -1.3516 | |
| 20 | S | A | -0.1148 | |
| 21 | Y | A | 0.7799 | |
| 22 | P | A | -0.0596 | |
| 23 | S | A | -0.2798 | |
| 24 | S | A | -0.5173 | |
| 25 | S | A | -1.1475 | |
| 26 | D | A | -1.7571 | |
| 27 | L | A | -0.6893 | |
| 28 | P | A | -1.4602 | |
| 29 | K | A | -2.5446 | |
| 30 | K | A | -3.0005 | |
| 31 | K | A | -2.3791 | |
| 32 | V | A | -0.5889 | |
| 33 | V | A | 0.5801 | |
| 34 | F | A | 0.0000 | |
| 35 | D | A | -2.0681 | |
| 36 | V | A | 0.0000 | |
| 37 | K | A | -2.2004 | |
| 38 | P | A | -1.3395 | |
| 39 | I | A | 0.0000 | |
| 40 | S | A | -1.5691 | |
| 41 | E | A | -2.2241 | |
| 42 | M | A | -1.8216 | |
| 43 | S | A | -2.0680 | |
| 44 | G | A | -3.2531 | |
| 45 | E | A | -3.7753 | |
| 46 | E | A | -3.5111 | |
| 47 | F | A | 0.0000 | |
| 48 | A | A | 0.0000 | |
| 49 | E | A | -3.6527 | |
| 50 | K | A | -2.5852 | |
| 51 | M | A | 0.0000 | |
| 52 | K | A | -2.8202 | |
| 53 | K | A | -2.3076 | |
| 54 | I | A | 0.0000 | |
| 55 | L | A | 0.0000 | |
| 56 | D | A | -2.8323 | |
| 57 | F | A | 0.0000 | |
| 58 | I | A | 0.0000 | |
| 59 | Y | A | -1.1406 | |
| 60 | E | A | -1.4229 | |
| 61 | V | A | 0.0000 | |
| 62 | M | A | 0.0000 | |
| 63 | S | A | -0.8038 | |
| 64 | T | A | -0.5868 | |
| 65 | D | A | 0.0000 | |
| 66 | P | A | -1.1962 | |
| 67 | R | A | -2.3045 | |
| 68 | M | A | -1.6736 | |
| 69 | T | A | -2.3821 | |
| 70 | E | A | -3.4406 | |
| 71 | K | A | -3.6882 | |
| 72 | D | A | -3.0783 | |
| 73 | L | A | -2.7883 | |
| 74 | E | A | -4.0695 | |
| 75 | K | A | -3.9907 | |
| 76 | L | A | 0.0000 | |
| 77 | K | A | -3.5319 | |
| 78 | K | A | -3.2341 | |
| 79 | Q | A | -2.1543 | |
| 80 | I | A | 0.0000 | |
| 81 | D | A | -2.8868 | |
| 82 | Y | A | -0.9148 | |
| 83 | Y | A | -1.4880 | |
| 84 | K | A | -2.8170 | |
| 85 | E | A | -2.9290 | |
| 86 | D | A | -2.4153 | |
| 87 | I | A | 0.0000 | |
| 88 | E | A | -3.6867 | |
| 89 | K | A | -3.5913 | |
| 90 | R | A | -3.0445 | |
| 91 | A | A | 0.0000 | |
| 92 | K | A | -3.4654 | |
| 93 | T | A | -2.3809 | |
| 94 | G | A | -2.4373 | |
| 95 | K | A | -2.4403 | |
| 96 | V | A | -1.6903 | |
| 97 | E | A | -2.5486 | |
| 98 | E | A | -2.6868 | |
| 99 | M | A | 0.0000 | |
| 100 | N | A | 0.0000 | |
| 101 | A | A | -1.5494 | |
| 102 | A | A | 0.0000 | |
| 103 | A | A | 0.0000 | |
| 104 | R | A | -2.4766 | |
| 105 | E | A | -1.8332 | |
| 106 | V | A | 0.0000 | |
| 107 | Y | A | -1.6779 | |
| 108 | N | A | -2.3022 | |
| 109 | F | A | 0.0000 | |
| 110 | A | A | 0.0000 | |
| 111 | E | A | -1.2328 | |
| 112 | Q | A | -1.5643 | |
| 113 | M | A | -0.5277 | |
| 114 | M | A | 0.0000 | |
| 115 | W | A | 0.1990 | |
| 116 | D | A | -0.0896 | |
| 117 | A | A | 0.0000 | |
| 118 | S | A | 0.1166 | |
| 119 | Y | A | 1.0138 | |
| 120 | R | A | -0.3684 | |
| 121 | G | A | -0.4582 | |
| 122 | H | A | -0.6850 | |
| 123 | S | A | -0.5525 | |
| 124 | I | A | -0.6911 | |
| 125 | S | A | 0.0000 | |
| 126 | V | A | -0.5136 | |
| 127 | D | A | -1.6044 | |
| 128 | K | A | -1.2377 | |
| 129 | F | A | 0.0000 | |
| 130 | Y | A | 0.0510 | |
| 131 | D | A | -0.9798 | |
| 132 | I | A | 0.0000 | |
| 133 | M | A | -0.7639 | |
| 134 | A | A | -0.6106 | |
| 135 | V | A | 0.0000 | |
| 136 | V | A | 0.0000 | |
| 137 | D | A | -1.9708 | |
| 138 | K | A | -1.5643 | |
| 139 | Y | A | 0.0000 | |
| 140 | L | A | -1.3195 | |
| 141 | E | A | -1.4982 | |
| 142 | T | A | -1.3903 | |
| 143 | P | A | -2.1872 | |
| 144 | E | A | -3.0746 | |
| 145 | N | A | -2.8415 | |
| 146 | D | A | -2.7375 | |
| 147 | L | A | -0.7335 | |
| 148 | N | A | -1.6633 | |
| 149 | S | A | -0.9946 |