| Chain sequence(s) |
A: IVIVKGH
C: IVIVKGH B: IVIVKGH D: IVIVKGH input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:49)
[INFO] Main: Simulation completed successfully. (00:00:50)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | I | A | 3.7158 | |
| 2 | V | A | 3.8373 | |
| 3 | I | A | 2.7126 | |
| 4 | V | A | 0.0000 | |
| 5 | K | A | -1.7800 | |
| 6 | G | A | -2.4634 | |
| 7 | H | A | -2.1294 | |
| 1 | I | B | 3.5771 | |
| 2 | V | B | 3.4781 | |
| 3 | I | B | 2.2573 | |
| 4 | V | B | 0.0000 | |
| 5 | K | B | -2.0396 | |
| 6 | G | B | -2.8067 | |
| 7 | H | B | -2.6290 | |
| 1 | I | C | 3.4545 | |
| 2 | V | C | 3.9545 | |
| 3 | I | C | 2.3272 | |
| 4 | V | C | 0.7602 | |
| 5 | K | C | -1.5840 | |
| 6 | G | C | -2.4542 | |
| 7 | H | C | -2.5955 | |
| 1 | I | D | 3.3877 | |
| 2 | V | D | 3.9286 | |
| 3 | I | D | 3.2331 | |
| 4 | V | D | 0.9799 | |
| 5 | K | D | -1.2189 | |
| 6 | G | D | -2.0892 | |
| 7 | H | D | -2.0774 |