| Chain sequence(s) |
C: KKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVL
input PDB |
| Selected Chain(s) | C |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | KL35C,TW45C,DW63C |
| Energy difference between WT (input) and mutated protein (by FoldX) | 0.132469 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] FoldX: Building mutant model (00:02:30)
[INFO] FoldX: Starting FoldX energy minimalization (00:03:07)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:42)
[INFO] Main: Simulation completed successfully. (00:04:43)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | C | -2.6129 | |
| 2 | K | C | -2.6714 | |
| 3 | V | C | -1.6251 | |
| 4 | V | C | -0.5773 | |
| 5 | L | C | -0.4356 | |
| 6 | G | C | 0.0000 | |
| 7 | K | C | -2.2818 | |
| 8 | K | C | -3.1958 | |
| 9 | G | C | -2.8787 | |
| 10 | D | C | -3.0436 | |
| 11 | T | C | -2.1809 | |
| 12 | V | C | -1.0134 | |
| 13 | E | C | -1.0152 | |
| 14 | L | C | 0.0000 | |
| 15 | T | C | -0.5877 | |
| 16 | C | C | 0.0000 | |
| 17 | T | C | -1.3151 | |
| 18 | A | C | 0.0000 | |
| 19 | S | C | -2.2241 | |
| 20 | Q | C | -2.7610 | |
| 21 | K | C | -3.2798 | |
| 22 | K | C | -2.8793 | |
| 23 | S | C | -1.5174 | |
| 24 | I | C | -1.6638 | |
| 25 | Q | C | -2.1112 | |
| 26 | F | C | 0.0000 | |
| 27 | H | C | -1.0006 | |
| 28 | W | C | 0.0000 | |
| 29 | K | C | -0.9230 | |
| 30 | N | C | 0.0000 | |
| 31 | S | C | -1.3296 | |
| 32 | N | C | -1.7404 | |
| 33 | Q | C | -1.4540 | |
| 34 | I | C | -0.3932 | |
| 35 | L | C | -0.1144 | mutated: KL35C |
| 36 | I | C | 0.0000 | |
| 37 | L | C | 0.0000 | |
| 38 | G | C | 0.0000 | |
| 39 | N | C | -0.4540 | |
| 40 | Q | C | -0.6086 | |
| 41 | G | C | -0.5848 | |
| 42 | S | C | -0.0166 | |
| 43 | F | C | 1.4259 | |
| 44 | L | C | 0.6366 | |
| 45 | W | C | 0.7731 | mutated: TW45C |
| 46 | K | C | -0.4574 | |
| 47 | G | C | 0.0000 | |
| 48 | P | C | -0.6108 | |
| 49 | S | C | 0.0000 | |
| 50 | K | C | -2.2777 | |
| 51 | L | C | 0.0000 | |
| 52 | N | C | -2.2488 | |
| 53 | D | C | -2.7594 | |
| 54 | R | C | -2.3089 | |
| 55 | A | C | 0.0000 | |
| 56 | D | C | -1.5959 | |
| 57 | S | C | -1.2932 | |
| 58 | R | C | -2.0811 | |
| 59 | R | C | -1.9041 | |
| 60 | S | C | -1.1150 | |
| 61 | L | C | -0.8945 | |
| 62 | W | C | 0.0000 | |
| 63 | W | C | -0.5500 | mutated: DW63C |
| 64 | Q | C | -2.0471 | |
| 65 | G | C | 0.0000 | |
| 66 | N | C | -1.5400 | |
| 67 | F | C | 0.0000 | |
| 68 | P | C | 0.0000 | |
| 69 | L | C | 0.0000 | |
| 70 | I | C | -0.9512 | |
| 71 | I | C | 0.0000 | |
| 72 | K | C | -2.7803 | |
| 73 | N | C | -3.0783 | |
| 74 | L | C | 0.0000 | |
| 75 | K | C | -2.5740 | |
| 76 | I | C | -1.6264 | |
| 77 | E | C | -1.8405 | |
| 78 | D | C | 0.0000 | |
| 79 | S | C | -0.9011 | |
| 80 | D | C | -1.0609 | |
| 81 | T | C | -1.2161 | |
| 82 | Y | C | 0.0000 | |
| 83 | I | C | -1.5547 | |
| 84 | C | C | 0.0000 | |
| 85 | E | C | -2.6538 | |
| 86 | V | C | 0.0000 | |
| 87 | E | C | -3.4096 | |
| 88 | D | C | -3.3267 | |
| 89 | Q | C | -3.1220 | |
| 90 | K | C | -3.4484 | |
| 91 | E | C | -2.6158 | |
| 92 | E | C | -2.8058 | |
| 93 | V | C | 0.0000 | |
| 94 | Q | C | -1.5223 | |
| 95 | L | C | 0.0000 | |
| 96 | L | C | 0.0000 | |
| 97 | V | C | 0.0000 | |
| 98 | F | C | 0.0000 | |
| 99 | G | C | 0.0000 | |
| 100 | L | C | 0.0000 | |
| 101 | T | C | -0.6772 | |
| 102 | A | C | -1.1889 | |
| 103 | N | C | -1.7526 | |
| 104 | S | C | -1.8346 | |
| 105 | D | C | -2.3906 | |
| 106 | T | C | -1.7307 | |
| 107 | H | C | -0.8966 | |
| 108 | L | C | 0.0000 | |
| 109 | L | C | 0.7528 | |
| 110 | Q | C | -0.7099 | |
| 111 | G | C | -1.3403 | |
| 112 | Q | C | -1.3908 | |
| 113 | S | C | -1.0810 | |
| 114 | L | C | 0.0000 | |
| 115 | T | C | -0.5399 | |
| 116 | L | C | 0.0000 | |
| 117 | T | C | -1.1023 | |
| 118 | L | C | 0.0000 | |
| 119 | E | C | -1.5831 | |
| 120 | S | C | -1.2317 | |
| 121 | P | C | 0.0000 | |
| 122 | P | C | -0.6861 | |
| 123 | G | C | -0.7903 | |
| 124 | S | C | -0.6572 | |
| 125 | S | C | -0.8914 | |
| 126 | P | C | -1.1854 | |
| 127 | S | C | -1.1564 | |
| 128 | V | C | 0.0000 | |
| 129 | Q | C | -1.7171 | |
| 130 | C | C | 0.0000 | |
| 131 | R | C | -2.9681 | |
| 132 | S | C | 0.0000 | |
| 133 | P | C | -2.2492 | |
| 134 | R | C | -2.9269 | |
| 135 | G | C | -2.4811 | |
| 136 | K | C | -2.9734 | |
| 137 | N | C | -2.4498 | |
| 138 | I | C | -1.3744 | |
| 139 | Q | C | -1.9045 | |
| 140 | G | C | -1.5328 | |
| 141 | G | C | -1.7693 | |
| 142 | K | C | -2.4006 | |
| 143 | T | C | -1.4702 | |
| 144 | L | C | 0.0000 | |
| 145 | S | C | -0.5633 | |
| 146 | V | C | -0.5049 | |
| 147 | S | C | -0.9894 | |
| 148 | Q | C | -1.8123 | |
| 149 | L | C | 0.0000 | |
| 150 | E | C | -0.4975 | |
| 151 | L | C | 1.1663 | |
| 152 | Q | C | -0.6851 | |
| 153 | D | C | 0.0000 | |
| 154 | S | C | -0.2265 | |
| 155 | G | C | -0.7261 | |
| 156 | T | C | -1.5557 | |
| 157 | W | C | 0.0000 | |
| 158 | T | C | -1.8886 | |
| 159 | C | C | 0.0000 | |
| 160 | T | C | -1.6338 | |
| 161 | V | C | 0.0000 | |
| 162 | L | C | -1.7396 | |
| 163 | Q | C | -1.8809 | |
| 164 | N | C | -2.6437 | |
| 165 | Q | C | -2.8369 | |
| 166 | K | C | -2.8004 | |
| 167 | K | C | -2.8990 | |
| 168 | V | C | -1.7116 | |
| 169 | E | C | -2.2162 | |
| 170 | F | C | 0.0000 | |
| 171 | K | C | -2.5053 | |
| 172 | I | C | -1.6225 | |
| 173 | D | C | -2.0309 | |
| 174 | I | C | 0.0000 | |
| 175 | V | C | 0.1834 | |
| 176 | V | C | 0.0000 | |
| 177 | L | C | 1.8338 |