Project name: query_structure

Status: done

Started: 2026-03-16 23:38:00
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Chain sequence(s) A: GSSVSSVPTKLEVVAATPTSLLISWDASSSSVSYYRITYGETGGNSPVQEFTVPSYSSTATISGLSPGVDYTITVYAYWEFEYGYWSYSPSSINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:31)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:32)
Show buried residues

Minimal score value
-2.4176
Maximal score value
1.6855
Average score
-0.2231
Total score value
-21.645

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.3920
2 S A -0.0258
3 S A 0.4661
4 V A 1.5726
5 S A 0.7824
6 S A 0.0000
7 V A 0.8419
8 P A 0.0000
9 T A -1.4616
10 K A -2.4176
11 L A -1.3960
12 E A -1.3418
13 V A 0.3763
14 V A 1.6855
15 A A 0.9493
16 A A 0.2938
17 T A -0.3792
18 P A -0.8147
19 T A -0.5327
20 S A -0.3099
21 L A 0.0000
22 L A 0.8016
23 I A 0.0000
24 S A -0.5468
25 W A 0.0000
26 D A -2.3748
27 A A -0.8408
28 S A -0.4317
29 S A -0.2258
30 S A -0.2054
31 S A -0.3836
32 V A 0.0000
33 S A -0.0324
34 Y A 0.2606
35 Y A 0.0000
36 R A -0.4730
37 I A 0.0000
38 T A -0.5543
39 Y A -0.2728
40 G A 0.0000
41 E A -1.3526
42 T A -1.2746
43 G A -1.3407
44 G A -1.2258
45 N A -1.6403
46 S A -0.7816
47 P A -0.2362
48 V A 0.5021
49 Q A -0.7741
50 E A -1.6165
51 F A -0.6210
52 T A -0.3146
53 V A 0.0000
54 P A 0.2012
55 S A 0.4403
56 Y A 1.2012
57 S A 0.3350
58 S A -0.2575
59 T A -0.0021
60 A A 0.0000
61 T A 0.2272
62 I A 0.0000
63 S A -0.4684
64 G A -0.6768
65 L A 0.0000
66 S A -0.8277
67 P A -1.0092
68 G A -1.1275
69 V A -0.9861
70 D A -1.8012
71 Y A 0.0000
72 T A -0.7685
73 I A 0.0000
74 T A -0.4706
75 V A 0.0000
76 Y A 0.5074
77 A A 0.0000
78 Y A 0.5659
79 W A 0.2214
80 E A -0.2191
81 F A 1.0510
82 E A -0.4945
83 Y A 1.0449
84 G A 0.5728
85 Y A 1.6287
86 W A 1.3752
87 S A 1.2429
88 Y A 1.4205
89 S A 1.0933
90 P A 0.3277
91 S A -0.2333
92 S A -0.4424
93 I A -0.6868
94 N A -1.6485
95 Y A -1.3722
96 R A -2.3425
97 T A -1.2082
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Laboratory of Theory of Biopolymers 2018