Project name: 197

Status: done

Started: 2025-06-23 11:43:13
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Chain sequence(s) H: DVQLQESGGGSVQAGGSLRLSCAASGDTSRTYLMAWFRQAPGKEREGVATTNKWGATTYADSVKGRFTISLDNAKNALYLQMNSLKPEDTAMYYCAAGRDYYANLDPDPRLYAYWGQGTQVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       runJob:   FoldX not utilized. Treating input pdb file as it was already optimized.    (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:00)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:01)
Show buried residues

Minimal score value
-3.0642
Maximal score value
0.7956
Average score
-0.843
Total score value
-105.3733

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D H -2.6274
2 V H 0.0000
3 Q H -2.3080
4 L H 0.0000
5 Q H -1.6666
6 E H 0.0000
7 S H -1.0295
8 G H -0.8939
9 G H -0.8433
11 G H -0.5936
12 S H -0.5773
13 V H -0.7580
14 Q H -1.6082
15 A H -1.6195
16 G H -1.3272
17 G H -1.0459
18 S H -0.9944
19 L H -0.6966
20 R H -1.2585
21 L H 0.0000
22 S H -0.5128
23 C H 0.0000
24 A H -0.9855
25 A H 0.0000
26 S H -1.9135
27 G H -2.2766
28 D H -3.0642
29 T H -2.4778
30 S H -2.0383
35 R H -2.5148
36 T H -1.3052
37 Y H 0.0000
38 L H 0.0155
39 M H 0.0000
40 A H 0.0000
41 W H 0.0000
42 F H 0.0000
43 R H 0.0000
44 Q H -1.7120
45 A H 0.0000
46 P H -1.1580
47 G H -1.5444
48 K H -2.3804
49 E H -2.9059
50 R H -2.1423
51 E H -1.5774
52 G H -0.8218
53 V H 0.0000
54 A H 0.0000
55 T H 0.0000
56 T H 0.0000
57 N H 0.0000
58 K H -0.4133
59 W H 0.7935
63 G H 0.0461
64 A H 0.0599
65 T H 0.0234
66 T H -0.5220
67 Y H -0.8609
68 A H -1.3500
69 D H -2.4194
70 S H -1.7596
71 V H 0.0000
72 K H -2.4264
74 G H -1.6565
75 R H -1.5741
76 F H 0.0000
77 T H -0.6792
78 I H 0.0000
79 S H -0.2023
80 L H -0.6556
81 D H -1.5319
82 N H -2.3445
83 A H -1.5953
84 K H -2.3674
85 N H -2.0357
86 A H 0.0000
87 L H 0.0000
88 Y H -0.0937
89 L H 0.0000
90 Q H -0.8026
91 M H 0.0000
92 N H -1.2059
93 S H -1.2044
94 L H 0.0000
95 K H -2.3588
96 P H -1.9089
97 E H -2.3468
98 D H 0.0000
99 T H -1.0584
100 A H 0.0000
101 M H -0.3592
102 Y H 0.0000
103 Y H -0.4117
104 C H 0.0000
105 A H 0.0000
106 A H 0.0000
107 G H 0.0000
108 R H -1.3308
109 D H -1.2934
110 Y H 0.6918
111 Y H 0.7956
111A A H 0.0754
111B N H -0.7569
111C L H -0.3080
112C D H -0.7644
112B P H -1.0143
112A D H -1.2661
112 P H -1.2220
113 R H -2.0363
114 L H -0.8600
115 Y H 0.0000
116 A H -0.8240
117 Y H -0.5431
118 W H -0.3683
119 G H -1.0934
120 Q H -1.5350
121 G H -0.8986
122 T H -0.8168
123 Q H -0.7764
124 V H 0.0000
125 T H -0.8373
126 V H 0.0000
127 S H -1.1537
128 S H -0.8524
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Laboratory of Theory of Biopolymers 2018