| Chain sequence(s) |
H: QVTLREESGPALVKPTQTLTLTCTVSGFSLSAYSVNWIRQPPGKALEWLAMIWGDGKIVYNSALKSRLTISKDTSKNQVVLTMTNMDPVDTATYYCAGDGYYPYAMDNWGQGSLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESK
L: DIVMTQSPDSLSVSLGERATINCRASKSVDSYGNSFMHWYQQKPGQPPKLLIYLASNLESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQNNEDPRTFGGGTKVEIKRTVAAPSVFIFPPSDEEQLKSGTASVVCLLNNFYPREAKVQQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACCEVTHQGLSSPVTKSFNRGEC input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:09:10)
[INFO] Main: Simulation completed successfully. (00:09:17)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.1152 | |
| 2 | V | H | 0.2042 | |
| 3 | T | H | 0.0536 | |
| 4 | L | H | 0.0000 | |
| 5 | R | H | -1.5843 | |
| 6 | E | H | -0.5383 | |
| 7 | S | H | -0.2796 | |
| 8 | G | H | -0.2062 | |
| 9 | P | H | -0.1399 | |
| 10 | A | H | 0.0394 | |
| 11 | L | H | 0.3010 | |
| 12 | V | H | 0.0000 | |
| 13 | K | H | -1.7098 | |
| 14 | P | H | -0.3708 | |
| 15 | T | H | -0.5062 | |
| 16 | Q | H | -1.1547 | |
| 17 | T | H | -0.2643 | |
| 18 | L | H | 0.0000 | |
| 19 | T | H | -0.0552 | |
| 20 | L | H | 0.0000 | |
| 21 | T | H | 0.0517 | |
| 22 | C | H | 0.0000 | |
| 23 | T | H | -0.0538 | |
| 24 | V | H | 0.0000 | |
| 25 | S | H | -0.1682 | |
| 26 | G | H | -0.3198 | |
| 27 | F | H | 0.4330 | |
| 28 | S | H | -0.0820 | |
| 29 | L | H | 0.0000 | |
| 30 | S | H | -0.2089 | |
| 31 | A | H | 0.0131 | |
| 32 | Y | H | 0.0000 | |
| 33 | S | H | 0.0000 | |
| 34 | V | H | 0.0000 | |
| 35 | N | H | 0.0000 | |
| 36 | W | H | 0.0000 | |
| 37 | I | H | 0.0000 | |
| 38 | R | H | 0.0000 | |
| 39 | Q | H | -0.1468 | |
| 40 | P | H | -0.1076 | |
| 41 | P | H | -0.3454 | |
| 42 | G | H | -0.8195 | |
| 43 | K | H | -1.7809 | |
| 44 | A | H | -0.2853 | |
| 45 | L | H | 0.0000 | |
| 46 | E | H | -0.4999 | |
| 47 | W | H | 0.0000 | |
| 48 | L | H | 0.0000 | |
| 49 | A | H | 0.0000 | |
| 50 | M | H | 0.0000 | |
| 51 | I | H | 0.0000 | |
| 52 | W | H | 0.1989 | |
| 53 | G | H | -0.3551 | |
| 54 | D | H | -1.8494 | |
| 55 | G | H | -0.9085 | |
| 56 | K | H | -1.5520 | |
| 57 | I | H | 0.8000 | |
| 58 | V | H | 0.0000 | |
| 59 | Y | H | 0.1811 | |
| 60 | N | H | -0.1448 | |
| 61 | S | H | -0.1833 | |
| 62 | A | H | 0.0579 | |
| 63 | L | H | -0.1357 | |
| 64 | K | H | -1.7092 | |
| 65 | S | H | -0.5800 | |
| 66 | R | H | -0.3833 | |
| 67 | L | H | 0.0000 | |
| 68 | T | H | -0.0549 | |
| 69 | I | H | 0.0000 | |
| 70 | S | H | -0.1997 | |
| 71 | K | H | -0.5228 | |
| 72 | D | H | -0.7568 | |
| 73 | T | H | -0.2563 | |
| 74 | S | H | -0.5329 | |
| 75 | K | H | -1.7759 | |
| 76 | N | H | -0.5770 | |
| 77 | Q | H | -0.3441 | |
| 78 | V | H | 0.0000 | |
| 79 | V | H | 0.5170 | |
| 80 | L | H | 0.0000 | |
| 81 | T | H | -0.0242 | |
| 82 | M | H | 0.0000 | |
| 82A | T | H | -0.2573 | |
| 82B | N | H | -1.2890 | |
| 82C | M | H | 0.0000 | |
| 83 | D | H | -1.1075 | |
| 84 | P | H | -0.1343 | |
| 85 | V | H | 1.7286 | |
| 86 | D | H | 0.0000 | |
| 87 | T | H | -0.0129 | |
| 88 | A | H | 0.0000 | |
| 89 | T | H | 0.0307 | |
| 90 | Y | H | 0.0000 | |
| 91 | Y | H | 0.0000 | |
| 92 | C | H | 0.0000 | |
| 93 | A | H | 0.0000 | |
| 94 | G | H | 0.0000 | |
| 95 | D | H | 0.0000 | |
| 96 | G | H | 0.1687 | |
| 97 | Y | H | 1.5377 | |
| 98 | Y | H | 1.6164 | |
| 99 | P | H | 0.0000 | |
| 100 | Y | H | 0.6792 | |
| 100A | A | H | 0.0000 | |
| 100B | M | H | 0.0000 | |
| 101 | D | H | -1.2715 | |
| 102 | N | H | -0.3968 | |
| 103 | W | H | 0.0858 | |
| 104 | G | H | 0.0000 | |
| 105 | Q | H | -1.2183 | |
| 106 | G | H | -0.3346 | |
| 107 | S | H | -0.0050 | |
| 108 | L | H | 0.2474 | |
| 109 | V | H | 0.0000 | |
| 110 | T | H | 0.0000 | |
| 111 | V | H | 0.0000 | |
| 112 | S | H | -0.0725 | |
| 113 | S | H | -0.2125 | |
| 114 | A | H | -0.0396 | |
| 115 | S | H | -0.2113 | |
| 116 | T | H | -0.2268 | |
| 117 | K | H | -0.9041 | |
| 118 | G | H | -0.2849 | |
| 119 | P | H | -0.0658 | |
| 120 | S | H | -0.0598 | |
| 121 | V | H | 0.1666 | |
| 122 | F | H | 0.0000 | |
| 123 | P | H | -0.0327 | |
| 124 | L | H | 0.0000 | |
| 125 | A | H | 0.0000 | |
| 126 | P | H | 0.0000 | |
| 127 | C | H | 0.1176 | |
| 128 | S | H | -0.2937 | |
| 129 | R | H | -0.6618 | |
| 130 | S | H | -0.2873 | |
| 131 | T | H | -0.1381 | |
| 132 | S | H | -0.3815 | |
| 133 | E | H | -0.9496 | |
| 134 | S | H | -0.3776 | |
| 135 | T | H | -0.1069 | |
| 136 | A | H | 0.0000 | |
| 137 | A | H | 0.0000 | |
| 138 | L | H | 0.0000 | |
| 139 | G | H | 0.0000 | |
| 140 | C | H | 0.0000 | |
| 141 | L | H | 0.0000 | |
| 142 | V | H | 0.0000 | |
| 143 | K | H | 0.0000 | |
| 144 | D | H | -0.3489 | |
| 145 | Y | H | 0.0000 | |
| 146 | F | H | 0.0000 | |
| 147 | P | H | 0.0000 | |
| 148 | E | H | -0.3700 | |
| 149 | P | H | -0.2255 | |
| 150 | V | H | 0.0000 | |
| 151 | T | H | -0.0335 | |
| 152 | V | H | 0.1813 | |
| 153 | S | H | -0.0213 | |
| 154 | W | H | 0.0000 | |
| 155 | N | H | -0.3246 | |
| 156 | S | H | -0.3499 | |
| 157 | G | H | -0.4944 | |
| 158 | A | H | 0.0119 | |
| 159 | L | H | 0.2027 | |
| 160 | T | H | -0.0716 | |
| 161 | S | H | -0.2746 | |
| 162 | G | H | -0.2457 | |
| 163 | V | H | 0.2883 | |
| 164 | H | H | -0.0467 | |
| 165 | T | H | -0.0492 | |
| 166 | F | H | 0.0000 | |
| 167 | P | H | -0.2241 | |
| 168 | A | H | 0.0339 | |
| 169 | V | H | 0.5835 | |
| 170 | L | H | 1.3391 | |
| 171 | Q | H | 0.0670 | |
| 172 | S | H | -0.2738 | |
| 173 | S | H | -0.2852 | |
| 174 | G | H | -0.1788 | |
| 175 | L | H | 0.2396 | |
| 176 | Y | H | 0.4341 | |
| 177 | S | H | 0.0000 | |
| 178 | L | H | 0.0000 | |
| 179 | S | H | 0.0000 | |
| 180 | S | H | 0.0000 | |
| 181 | V | H | 0.0000 | |
| 182 | V | H | 0.0000 | |
| 183 | T | H | -0.0096 | |
| 184 | V | H | 0.0000 | |
| 185 | P | H | -0.2756 | |
| 186 | S | H | -0.1733 | |
| 187 | S | H | -0.2335 | |
| 188 | S | H | -0.0039 | |
| 189 | L | H | 0.2501 | |
| 190 | G | H | -0.4169 | |
| 191 | T | H | -0.4446 | |
| 192 | K | H | -1.6748 | |
| 193 | T | H | -0.3310 | |
| 194 | Y | H | 0.0000 | |
| 195 | T | H | -0.3076 | |
| 196 | C | H | 0.0000 | |
| 197 | N | H | -0.3850 | |
| 198 | V | H | 0.0000 | |
| 199 | D | H | -0.6424 | |
| 200 | H | H | 0.0000 | |
| 201 | K | H | -1.8639 | |
| 202 | P | H | -0.3524 | |
| 203 | S | H | -0.2977 | |
| 204 | N | H | -1.4969 | |
| 205 | T | H | -0.5508 | |
| 206 | K | H | -1.6904 | |
| 207 | V | H | -0.2716 | |
| 208 | D | H | -1.7879 | |
| 209 | K | H | -0.9174 | |
| 210 | R | H | -1.8919 | |
| 211 | V | H | 0.0000 | |
| 212 | E | H | -1.8297 | |
| 213 | S | H | -0.6847 | |
| 214 | K | H | -1.7094 | |
| 1 | D | L | -1.7894 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 1.7728 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.0576 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.2615 | |
| 8 | P | L | -0.5539 | |
| 9 | D | L | -1.8475 | |
| 10 | S | L | -0.4745 | |
| 11 | L | L | 0.1214 | |
| 12 | S | L | -0.1531 | |
| 13 | V | L | 0.1566 | |
| 14 | S | L | 0.0627 | |
| 15 | L | L | 1.4543 | |
| 16 | G | L | -0.4069 | |
| 17 | E | L | -1.9072 | |
| 18 | R | L | -2.1301 | |
| 19 | A | L | 0.0000 | |
| 20 | T | L | -0.0729 | |
| 21 | I | L | 0.0000 | |
| 22 | N | L | -0.9189 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -1.7318 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -0.4752 | |
| 27 | K | L | -1.7694 | |
| 27A | S | L | -0.5312 | |
| 27B | V | L | 0.0000 | |
| 27C | D | L | -0.5771 | |
| 27D | S | L | 0.0438 | |
| 28 | Y | L | 1.2140 | |
| 29 | G | L | -0.4189 | |
| 30 | N | L | -1.1325 | |
| 31 | S | L | -0.2495 | |
| 32 | F | L | 0.2007 | |
| 33 | M | L | 0.0000 | |
| 34 | H | L | 0.0000 | |
| 35 | W | L | 0.0000 | |
| 36 | Y | L | 0.0000 | |
| 37 | Q | L | 0.0000 | |
| 38 | Q | L | 0.0000 | |
| 39 | K | L | -0.6362 | |
| 40 | P | L | -0.3797 | |
| 41 | G | L | -0.6656 | |
| 42 | Q | L | -0.9968 | |
| 43 | P | L | -0.2066 | |
| 44 | P | L | 0.0000 | |
| 45 | K | L | -1.3588 | |
| 46 | L | L | 0.0000 | |
| 47 | L | L | 0.0000 | |
| 48 | I | L | 0.0000 | |
| 49 | Y | L | 0.3256 | |
| 50 | L | L | 0.3099 | |
| 51 | A | L | 0.0000 | |
| 52 | S | L | -0.3811 | |
| 53 | N | L | -0.8020 | |
| 54 | L | L | 0.4275 | |
| 55 | E | L | -0.2921 | |
| 56 | S | L | -0.3654 | |
| 57 | G | L | -0.5052 | |
| 58 | V | L | 0.0000 | |
| 59 | P | L | -0.4320 | |
| 60 | D | L | -1.8695 | |
| 61 | R | L | -0.6587 | |
| 62 | F | L | 0.0000 | |
| 63 | S | L | -0.1762 | |
| 64 | G | L | -0.1558 | |
| 65 | S | L | -0.2922 | |
| 66 | G | L | -0.4547 | |
| 67 | S | L | -0.2948 | |
| 68 | G | L | -0.1370 | |
| 69 | T | L | -0.2506 | |
| 70 | D | L | -1.4282 | |
| 71 | F | L | 0.0000 | |
| 72 | T | L | -0.1275 | |
| 73 | L | L | 0.0000 | |
| 74 | T | L | -0.0253 | |
| 75 | I | L | 0.0000 | |
| 76 | S | L | -0.3240 | |
| 77 | S | L | -0.4961 | |
| 78 | L | L | 0.0000 | |
| 79 | Q | L | -0.4466 | |
| 80 | A | L | -0.3229 | |
| 81 | E | L | -1.4319 | |
| 82 | D | L | 0.0000 | |
| 83 | V | L | 0.0000 | |
| 84 | A | L | 0.0000 | |
| 85 | V | L | 0.2678 | |
| 86 | Y | L | 0.0000 | |
| 87 | Y | L | 0.0000 | |
| 88 | C | L | 0.0000 | |
| 89 | Q | L | 0.0000 | |
| 90 | Q | L | 0.0000 | |
| 91 | N | L | -0.2471 | |
| 92 | N | L | -0.5999 | |
| 93 | E | L | -2.1954 | |
| 94 | D | L | -2.1283 | |
| 95 | P | L | 0.0000 | |
| 96 | R | L | 0.0000 | |
| 97 | T | L | 0.0237 | |
| 98 | F | L | 0.1881 | |
| 99 | G | L | 0.0000 | |
| 100 | G | L | -0.4763 | |
| 101 | G | L | -0.1397 | |
| 102 | T | L | 0.0000 | |
| 103 | K | L | -0.2431 | |
| 104 | V | L | 0.0000 | |
| 105 | E | L | -0.3266 | |
| 106 | I | L | 0.0000 | |
| 107 | K | L | -1.2848 | |
| 108 | R | L | -0.7619 | |
| 109 | T | L | 0.1047 | |
| 110 | V | L | 1.4658 | |
| 111 | A | L | 0.2823 | |
| 112 | A | L | 0.0022 | |
| 113 | P | L | 0.0000 | |
| 114 | S | L | -0.1675 | |
| 115 | V | L | 0.0000 | |
| 116 | F | L | 0.0000 | |
| 117 | I | L | 0.0000 | |
| 118 | F | L | 0.0000 | |
| 119 | P | L | 0.0000 | |
| 120 | P | L | 0.0000 | |
| 121 | S | L | 0.0000 | |
| 122 | D | L | -2.0652 | |
| 123 | E | L | -1.8608 | |
| 124 | Q | L | 0.0000 | |
| 125 | L | L | -0.1019 | |
| 126 | K | L | -1.7014 | |
| 127 | S | L | -0.5542 | |
| 128 | G | L | -0.3288 | |
| 129 | T | L | -0.1458 | |
| 130 | A | L | 0.0000 | |
| 131 | S | L | 0.0000 | |
| 132 | V | L | 0.0000 | |
| 133 | V | L | 0.0000 | |
| 134 | C | L | 0.0000 | |
| 135 | L | L | 0.0000 | |
| 136 | L | L | 0.0000 | |
| 137 | N | L | 0.0000 | |
| 138 | N | L | -0.5089 | |
| 139 | F | L | 0.0000 | |
| 140 | Y | L | 0.0000 | |
| 141 | P | L | -0.3722 | |
| 142 | R | L | -2.1280 | |
| 143 | E | L | -2.1424 | |
| 144 | A | L | -0.6356 | |
| 145 | K | L | -1.6652 | |
| 146 | V | L | -0.1800 | |
| 147 | Q | L | -0.1711 | |
| 148 | W | L | 0.0000 | |
| 149 | K | L | -0.1171 | |
| 150 | V | L | 0.0000 | |
| 151 | D | L | -1.0878 | |
| 152 | N | L | -1.4263 | |
| 153 | A | L | 0.1027 | |
| 154 | L | L | 1.4746 | |
| 155 | Q | L | -0.0129 | |
| 156 | S | L | -0.3442 | |
| 157 | G | L | -0.7062 | |
| 158 | N | L | -1.2170 | |
| 159 | S | L | -0.3306 | |
| 160 | Q | L | -0.5323 | |
| 161 | E | L | -1.6519 | |
| 162 | S | L | -0.2701 | |
| 163 | V | L | 0.2711 | |
| 164 | T | L | -0.2340 | |
| 165 | E | L | -1.5025 | |
| 166 | Q | L | 0.0000 | |
| 167 | D | L | -0.6135 | |
| 168 | S | L | -0.7755 | |
| 169 | K | L | -1.8413 | |
| 170 | D | L | -0.9052 | |
| 171 | S | L | 0.0000 | |
| 172 | T | L | 0.0000 | |
| 173 | Y | L | 0.0000 | |
| 174 | S | L | 0.0000 | |
| 175 | L | L | 0.0000 | |
| 176 | S | L | 0.0000 | |
| 177 | S | L | 0.0000 | |
| 178 | T | L | -0.0082 | |
| 179 | L | L | 0.0000 | |
| 180 | T | L | 0.0134 | |
| 181 | L | L | 0.1227 | |
| 182 | S | L | -0.2188 | |
| 183 | K | L | -0.7070 | |
| 184 | A | L | -0.3110 | |
| 185 | D | L | -1.3843 | |
| 186 | Y | L | 0.0000 | |
| 187 | E | L | -1.8713 | |
| 188 | K | L | -2.0467 | |
| 189 | H | L | -0.9241 | |
| 190 | K | L | -1.3865 | |
| 191 | V | L | 0.1068 | |
| 192 | Y | L | 0.0000 | |
| 193 | A | L | 0.0000 | |
| 194 | C | L | 0.0000 | |
| 195 | E | L | -0.3888 | |
| 196 | V | L | 0.0000 | |
| 197 | T | L | -0.0782 | |
| 198 | H | L | 0.0000 | |
| 199 | Q | L | -1.2287 | |
| 200 | G | L | -0.3350 | |
| 201 | L | L | 0.1805 | |
| 202 | S | L | -0.2059 | |
| 203 | S | L | -0.2937 | |
| 204 | P | L | -0.2068 | |
| 205 | V | L | 0.3762 | |
| 206 | T | L | -0.1241 | |
| 207 | K | L | -0.6385 | |
| 208 | S | L | -0.2989 | |
| 209 | F | L | 0.0000 | |
| 210 | N | L | -0.1326 | |
| 211 | R | L | -0.6511 | |
| 212 | G | L | -0.8930 | |
| 213 | E | L | -1.7726 | |
| 214 | C | L | 0.3865 |