Project name: Atacicept

Status: done

Started: 2025-10-27 10:42:44
Settings
Chain sequence(s) A: AMRSCPEEQYWDPLLGTCMSCKTICNHQSQRTCAAFCRSLSCRKEQGKFYDHLLRDCISCASICGQHPKQCAYFCENKLRS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:45)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:45)
Show buried residues

Minimal score value
-3.9851
Maximal score value
1.91
Average score
-1.1324
Total score value
-91.7281

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
30 A A 0.0052
31 M A 0.1898
32 R A -1.3303
33 S A -0.9554
34 C A -1.0769
35 P A -1.7618
36 E A -2.7676
37 E A -2.9789
38 Q A -1.8175
39 Y A -0.5216
40 W A 0.5081
41 D A 0.7659
42 P A 0.7791
43 L A 1.9100
44 L A 1.8207
45 G A 0.6192
46 T A 0.3432
47 C A -0.0826
48 M A 0.0066
49 S A -1.1800
50 C A 0.0000
51 K A -2.0804
52 T A -1.0891
53 I A -1.2063
54 C A -1.6199
55 N A -2.1590
56 H A -2.1913
57 Q A -2.3448
58 S A -2.0895
59 Q A -1.8487
60 R A -2.3004
61 T A -1.4128
62 C A 0.0000
63 A A -1.3038
64 A A -1.8909
65 F A -1.5551
66 C A -1.1544
67 R A -1.9970
68 S A -1.9519
69 L A -1.7994
70 S A -1.9720
71 C A 0.0000
72 R A -3.8873
73 K A -3.8400
74 E A -3.9851
75 Q A -3.0379
76 G A 0.0000
77 K A -2.4657
78 F A -1.8722
79 Y A 0.0000
80 D A -0.7794
81 H A -0.8840
82 L A 0.8867
83 L A 0.5239
84 R A -2.0073
85 D A -2.2378
86 C A -1.6901
87 I A -0.2567
88 S A -0.6199
89 C A 0.0000
90 A A -0.2213
91 S A -0.2456
92 I A -0.2412
93 C A -0.5132
94 G A -1.1308
95 Q A -1.6196
96 H A -1.4958
97 P A -1.6493
98 K A -2.2731
99 Q A -2.0263
100 C A 0.0000
101 A A -1.0415
102 Y A -0.0921
103 F A -0.7511
104 C A 0.0000
105 E A -2.0310
106 N A -2.1126
107 K A -1.9600
108 L A -0.8310
109 R A -2.3296
110 S A -1.5187
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Laboratory of Theory of Biopolymers 2018