| Chain sequence(s) |
L: CVFDTSFNEYYGFGLC
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:06)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 0 | C | L | 1.0466 | |
| 1 | V | L | 1.9047 | |
| 2 | F | L | 1.4921 | |
| 3 | D | L | -1.5258 | |
| 4 | T | L | -0.2676 | |
| 5 | S | L | 0.1510 | |
| 6 | F | L | 1.0708 | |
| 7 | N | L | -1.3549 | |
| 8 | E | L | -1.9499 | |
| 9 | Y | L | 0.6085 | |
| 10 | Y | L | 0.7640 | |
| 11 | G | L | 0.6285 | |
| 12 | F | L | 1.9897 | |
| 13 | G | L | 0.1846 | |
| 14 | L | L | 1.7976 | |
| 15 | C | L | 0.8929 |