| Chain sequence(s) |
A: QQSFRPKALVIPVSKDASTLQYTTRITQRTPLVPINLVLDLGGQFLWVDCEQNYVSSTYRPARCRSAQCSLARASGCGDCFSSPKPGCNNNTCGLTPDNTVTRTATGGELAYDVVSVPSTNGFNPGRNVSVSQFLFTCAPTFLLEGLAAGVSGMAGLGRTRISLPSQFASAFSFDRKFAICLSSSVSSNGVVFFGDGPYVMLPNVDVSESLIYTPLFINPVSTASAFSQGEASSEYFIKVNSIKVNEKSVAVNTTLLSINRDGVGGTKISTVNPYTVLEASIFKAVTEAFISECKSMNITRVSSVGPFEVCFSRDNVLSTRVGPAVPSIDLVLQNESTFWRVFGANSMVQVNDDVLCLAVVNGGESPRTSVVIGGYQLENNLLQFDLATSRLGFSSSLLFRQTTCSNFNFTS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:32)
[INFO] Main: Simulation completed successfully. (00:03:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.6665 | |
| 2 | Q | A | -1.8278 | |
| 3 | S | A | -1.1292 | |
| 4 | F | A | -0.8559 | |
| 5 | R | A | -1.9408 | |
| 6 | P | A | 0.0000 | |
| 7 | K | A | -2.6712 | |
| 8 | A | A | 0.0000 | |
| 9 | L | A | 0.0000 | |
| 10 | V | A | 0.0000 | |
| 11 | I | A | 0.0000 | |
| 12 | P | A | -0.7145 | |
| 13 | V | A | 0.0000 | |
| 14 | S | A | -0.5448 | |
| 15 | K | A | 0.0225 | |
| 16 | D | A | -0.0164 | |
| 17 | A | A | 0.2438 | |
| 18 | S | A | -0.0623 | |
| 19 | T | A | -0.0776 | |
| 20 | L | A | 0.2643 | |
| 21 | Q | A | 0.0000 | |
| 22 | Y | A | 0.0000 | |
| 23 | T | A | -0.7306 | |
| 24 | T | A | 0.0000 | |
| 25 | R | A | -2.0806 | |
| 26 | I | A | 0.0000 | |
| 27 | T | A | -0.2029 | |
| 28 | Q | A | 0.0000 | |
| 29 | R | A | 0.0000 | |
| 30 | T | A | 0.6200 | |
| 31 | P | A | 0.6642 | |
| 32 | L | A | 1.2779 | |
| 33 | V | A | 1.1124 | |
| 34 | P | A | -0.2389 | |
| 35 | I | A | 0.0000 | |
| 36 | N | A | -1.2779 | |
| 37 | L | A | 0.0000 | |
| 38 | V | A | 0.0000 | |
| 39 | L | A | 0.0000 | |
| 40 | D | A | 0.0000 | |
| 41 | L | A | 0.0000 | |
| 42 | G | A | -0.2634 | |
| 43 | G | A | 0.0000 | |
| 44 | Q | A | -0.5790 | |
| 45 | F | A | 0.0000 | |
| 46 | L | A | 0.0000 | |
| 47 | W | A | 0.0000 | |
| 48 | V | A | 0.0000 | |
| 49 | D | A | 0.0000 | |
| 50 | C | A | 0.0000 | |
| 51 | E | A | -2.2788 | |
| 52 | Q | A | -2.3526 | |
| 53 | N | A | -1.7197 | |
| 54 | Y | A | 0.0000 | |
| 55 | V | A | 1.1424 | |
| 56 | S | A | 0.6127 | |
| 57 | S | A | -0.0833 | |
| 58 | T | A | -0.4333 | |
| 59 | Y | A | 0.0000 | |
| 60 | R | A | -1.6982 | |
| 61 | P | A | -1.4874 | |
| 62 | A | A | 0.0000 | |
| 63 | R | A | -2.7253 | |
| 64 | C | A | -2.0608 | |
| 65 | R | A | -2.3557 | |
| 66 | S | A | -1.4269 | |
| 67 | A | A | -0.8102 | |
| 68 | Q | A | -0.9971 | |
| 69 | C | A | 0.0000 | |
| 70 | S | A | -1.0744 | |
| 71 | L | A | -0.4335 | |
| 72 | A | A | -1.0683 | |
| 73 | R | A | -2.0162 | |
| 74 | A | A | -1.2149 | |
| 75 | S | A | -0.6899 | |
| 76 | G | A | -0.7551 | |
| 77 | C | A | -0.9517 | |
| 78 | G | A | -1.4477 | |
| 79 | D | A | -2.1721 | |
| 80 | C | A | -0.6469 | |
| 81 | F | A | 1.1580 | |
| 82 | S | A | 0.1739 | |
| 83 | S | A | -0.1617 | |
| 84 | P | A | -0.6497 | |
| 85 | K | A | -0.9021 | |
| 86 | P | A | -0.9742 | |
| 87 | G | A | -0.9161 | |
| 88 | C | A | -0.9205 | |
| 89 | N | A | -1.8320 | |
| 90 | N | A | -2.5778 | |
| 91 | N | A | -2.9218 | |
| 92 | T | A | 0.0000 | |
| 93 | C | A | 0.0000 | |
| 94 | G | A | -0.9706 | |
| 95 | L | A | 0.0000 | |
| 96 | T | A | -0.2255 | |
| 97 | P | A | 0.0000 | |
| 98 | D | A | -0.5390 | |
| 99 | N | A | 0.0000 | |
| 100 | T | A | -0.5455 | |
| 101 | V | A | -0.2798 | |
| 102 | T | A | -0.9994 | |
| 103 | R | A | -1.7705 | |
| 104 | T | A | -0.8707 | |
| 105 | A | A | -0.5514 | |
| 106 | T | A | -0.1348 | |
| 107 | G | A | -0.5727 | |
| 108 | G | A | -0.3691 | |
| 109 | E | A | 0.0000 | |
| 110 | L | A | 0.0000 | |
| 111 | A | A | 0.0000 | |
| 112 | Y | A | -0.6480 | |
| 113 | D | A | 0.0000 | |
| 114 | V | A | -0.1919 | |
| 115 | V | A | 0.0000 | |
| 116 | S | A | 0.0000 | |
| 117 | V | A | 0.0000 | |
| 118 | P | A | -1.1859 | |
| 119 | S | A | 0.0000 | |
| 120 | T | A | 0.0000 | |
| 121 | N | A | -1.5230 | |
| 122 | G | A | 0.0000 | |
| 123 | F | A | 0.2525 | |
| 124 | N | A | -0.2195 | |
| 125 | P | A | 0.0000 | |
| 126 | G | A | -1.4777 | |
| 127 | R | A | -1.9849 | |
| 128 | N | A | -2.0334 | |
| 129 | V | A | 0.0000 | |
| 130 | S | A | -0.5244 | |
| 131 | V | A | -0.2516 | |
| 132 | S | A | -0.6386 | |
| 133 | Q | A | -1.3557 | |
| 134 | F | A | 0.0000 | |
| 135 | L | A | 0.0000 | |
| 136 | F | A | 0.0000 | |
| 137 | T | A | 0.0000 | |
| 138 | C | A | 0.0000 | |
| 139 | A | A | 0.0000 | |
| 140 | P | A | -0.2197 | |
| 141 | T | A | -0.0600 | |
| 142 | F | A | 1.2430 | |
| 143 | L | A | 0.0000 | |
| 144 | L | A | -0.0748 | |
| 145 | E | A | -1.1600 | |
| 146 | G | A | -0.8949 | |
| 147 | L | A | 0.0000 | |
| 148 | A | A | 0.0000 | |
| 149 | A | A | -0.5281 | |
| 150 | G | A | -0.5001 | |
| 151 | V | A | 0.0000 | |
| 152 | S | A | -0.3426 | |
| 153 | G | A | 0.0000 | |
| 154 | M | A | 0.0000 | |
| 155 | A | A | 0.0000 | |
| 156 | G | A | 0.0000 | |
| 157 | L | A | 0.0000 | |
| 158 | G | A | 0.0000 | |
| 159 | R | A | -0.7103 | |
| 160 | T | A | -0.9903 | |
| 161 | R | A | -1.3574 | |
| 162 | I | A | 0.0000 | |
| 163 | S | A | 0.0000 | |
| 164 | L | A | 0.0000 | |
| 165 | P | A | 0.0000 | |
| 166 | S | A | 0.0000 | |
| 167 | Q | A | 0.0000 | |
| 168 | F | A | 0.0000 | |
| 169 | A | A | 0.0000 | |
| 170 | S | A | -0.7789 | |
| 171 | A | A | -0.3999 | |
| 172 | F | A | -0.8875 | |
| 173 | S | A | -1.3152 | |
| 174 | F | A | 0.0000 | |
| 175 | D | A | -2.7404 | |
| 176 | R | A | -2.1227 | |
| 177 | K | A | -1.5243 | |
| 178 | F | A | 0.0000 | |
| 179 | A | A | 0.0000 | |
| 180 | I | A | 0.0000 | |
| 181 | C | A | 0.0000 | |
| 182 | L | A | 0.0000 | |
| 183 | S | A | 0.0000 | |
| 184 | S | A | 0.0778 | |
| 185 | S | A | 0.3707 | |
| 186 | V | A | 1.2617 | |
| 187 | S | A | 0.2813 | |
| 188 | S | A | -0.2837 | |
| 189 | N | A | -0.8201 | |
| 190 | G | A | 0.0000 | |
| 191 | V | A | 0.0000 | |
| 192 | V | A | 0.0000 | |
| 193 | F | A | 0.0000 | |
| 194 | F | A | 0.0000 | |
| 195 | G | A | 0.0000 | |
| 196 | D | A | -1.8595 | |
| 197 | G | A | -1.1030 | |
| 198 | P | A | -0.7843 | |
| 199 | Y | A | 0.0000 | |
| 200 | V | A | 0.0000 | |
| 201 | M | A | 0.0000 | |
| 202 | L | A | -0.0229 | |
| 203 | P | A | -0.5910 | |
| 204 | N | A | -0.9817 | |
| 205 | V | A | -0.8917 | |
| 206 | D | A | -1.1997 | |
| 207 | V | A | 0.0000 | |
| 208 | S | A | -1.0954 | |
| 209 | E | A | -1.9066 | |
| 210 | S | A | -0.7844 | |
| 211 | L | A | 0.1010 | |
| 212 | I | A | 0.8502 | |
| 213 | Y | A | 0.5867 | |
| 214 | T | A | 0.0000 | |
| 215 | P | A | -0.5441 | |
| 216 | L | A | 0.0000 | |
| 217 | F | A | 0.8211 | |
| 218 | I | A | 1.3181 | |
| 219 | N | A | 0.0000 | |
| 220 | P | A | -0.5274 | |
| 221 | V | A | -0.6780 | |
| 222 | S | A | 0.0000 | |
| 223 | T | A | 0.0074 | |
| 224 | A | A | -0.2337 | |
| 225 | S | A | -0.4491 | |
| 226 | A | A | -0.1097 | |
| 227 | F | A | 0.2388 | |
| 228 | S | A | -0.6368 | |
| 229 | Q | A | -1.4234 | |
| 230 | G | A | -1.2048 | |
| 231 | E | A | -0.9778 | |
| 232 | A | A | -0.2357 | |
| 233 | S | A | 0.0000 | |
| 234 | S | A | 0.0000 | |
| 235 | E | A | -0.1088 | |
| 236 | Y | A | 0.0000 | |
| 237 | F | A | 0.0000 | |
| 238 | I | A | 0.0000 | |
| 239 | K | A | -1.1810 | |
| 240 | V | A | 0.0000 | |
| 241 | N | A | -1.1620 | |
| 242 | S | A | -0.9666 | |
| 243 | I | A | 0.0000 | |
| 244 | K | A | -1.8470 | |
| 245 | V | A | 0.0000 | |
| 246 | N | A | -2.2168 | |
| 247 | E | A | -3.1875 | |
| 248 | K | A | -3.0347 | |
| 249 | S | A | -1.7087 | |
| 250 | V | A | 0.0000 | |
| 251 | A | A | -0.4048 | |
| 252 | V | A | -0.5979 | |
| 253 | N | A | -1.1444 | |
| 254 | T | A | -0.6607 | |
| 255 | T | A | -0.3760 | |
| 256 | L | A | -0.0548 | |
| 257 | L | A | 0.0000 | |
| 258 | S | A | -0.5691 | |
| 259 | I | A | -0.4565 | |
| 260 | N | A | -1.7733 | |
| 261 | R | A | -2.8573 | |
| 262 | D | A | -2.7076 | |
| 263 | G | A | 0.0000 | |
| 264 | V | A | -0.6543 | |
| 265 | G | A | 0.0000 | |
| 266 | G | A | 0.0000 | |
| 267 | T | A | 0.0000 | |
| 268 | K | A | -0.1693 | |
| 269 | I | A | 0.0000 | |
| 270 | S | A | 0.0000 | |
| 271 | T | A | 0.0000 | |
| 272 | V | A | 0.3286 | |
| 273 | N | A | 0.0540 | |
| 274 | P | A | 0.1574 | |
| 275 | Y | A | 0.3045 | |
| 276 | T | A | 0.0000 | |
| 277 | V | A | 0.1343 | |
| 278 | L | A | 0.0000 | |
| 279 | E | A | 0.0000 | |
| 280 | A | A | -1.3064 | |
| 281 | S | A | -1.2758 | |
| 282 | I | A | 0.0000 | |
| 283 | F | A | 0.0000 | |
| 284 | K | A | -1.9133 | |
| 285 | A | A | -1.3411 | |
| 286 | V | A | 0.0000 | |
| 287 | T | A | 0.0000 | |
| 288 | E | A | -2.2023 | |
| 289 | A | A | -1.6968 | |
| 290 | F | A | 0.0000 | |
| 291 | I | A | 0.0000 | |
| 292 | S | A | -1.3503 | |
| 293 | E | A | 0.0000 | |
| 294 | C | A | 0.0000 | |
| 295 | K | A | -2.5202 | |
| 296 | S | A | -1.3117 | |
| 297 | M | A | -1.0141 | |
| 298 | N | A | -2.3419 | |
| 299 | I | A | 0.0000 | |
| 300 | T | A | -2.1392 | |
| 301 | R | A | -2.2123 | |
| 302 | V | A | -0.5778 | |
| 303 | S | A | -0.4259 | |
| 304 | S | A | -0.5428 | |
| 305 | V | A | 0.0344 | |
| 306 | G | A | -0.4809 | |
| 307 | P | A | -0.5913 | |
| 308 | F | A | 0.0000 | |
| 309 | E | A | -0.8381 | |
| 310 | V | A | 0.0000 | |
| 311 | C | A | 0.0000 | |
| 312 | F | A | 0.0000 | |
| 313 | S | A | -2.2761 | |
| 314 | R | A | -3.2745 | |
| 315 | D | A | -3.0483 | |
| 316 | N | A | -1.6594 | |
| 317 | V | A | 0.0000 | |
| 318 | L | A | 0.8460 | |
| 319 | S | A | -0.0607 | |
| 320 | T | A | -0.6512 | |
| 321 | R | A | -1.7101 | |
| 322 | V | A | 0.0000 | |
| 323 | G | A | -0.3743 | |
| 324 | P | A | -0.2378 | |
| 325 | A | A | 0.2912 | |
| 326 | V | A | 0.3918 | |
| 327 | P | A | 0.0000 | |
| 328 | S | A | -0.7206 | |
| 329 | I | A | 0.0000 | |
| 330 | D | A | 0.0000 | |
| 331 | L | A | 0.0000 | |
| 332 | V | A | 0.0000 | |
| 333 | L | A | 0.0000 | |
| 334 | Q | A | -1.5769 | |
| 335 | N | A | -1.9141 | |
| 336 | E | A | -2.3169 | |
| 337 | S | A | -1.2532 | |
| 338 | T | A | 0.0000 | |
| 339 | F | A | -0.1024 | |
| 340 | W | A | 0.0000 | |
| 341 | R | A | -0.3619 | |
| 342 | V | A | 0.2007 | |
| 343 | F | A | 0.1050 | |
| 344 | G | A | 0.0000 | |
| 345 | A | A | -0.2512 | |
| 346 | N | A | 0.0000 | |
| 347 | S | A | 0.0000 | |
| 348 | M | A | 0.0000 | |
| 349 | V | A | -0.3638 | |
| 350 | Q | A | -1.9713 | |
| 351 | V | A | -1.1689 | |
| 352 | N | A | -2.7933 | |
| 353 | D | A | -3.7610 | |
| 354 | D | A | -3.8421 | |
| 355 | V | A | -2.3846 | |
| 356 | L | A | 0.0000 | |
| 357 | C | A | 0.0000 | |
| 358 | L | A | 0.0000 | |
| 359 | A | A | 0.0000 | |
| 360 | V | A | 0.0000 | |
| 361 | V | A | -0.1119 | |
| 362 | N | A | -1.0513 | |
| 363 | G | A | -0.8695 | |
| 364 | G | A | -1.2724 | |
| 365 | E | A | -2.2229 | |
| 366 | S | A | -1.3172 | |
| 367 | P | A | -0.9181 | |
| 368 | R | A | -0.9464 | |
| 369 | T | A | 0.0000 | |
| 370 | S | A | 0.0000 | |
| 371 | V | A | 0.0000 | |
| 372 | V | A | 0.0000 | |
| 373 | I | A | 0.0000 | |
| 374 | G | A | 0.0000 | |
| 375 | G | A | 0.0000 | |
| 376 | Y | A | 0.1858 | |
| 377 | Q | A | 0.0000 | |
| 378 | L | A | 0.0000 | |
| 379 | E | A | 0.0000 | |
| 380 | N | A | 0.0000 | |
| 381 | N | A | 0.0000 | |
| 382 | L | A | 0.0000 | |
| 383 | L | A | 0.0000 | |
| 384 | Q | A | 0.0000 | |
| 385 | F | A | 0.0000 | |
| 386 | D | A | 0.0000 | |
| 387 | L | A | -0.7031 | |
| 388 | A | A | -0.6697 | |
| 389 | T | A | -0.4140 | |
| 390 | S | A | -0.1830 | |
| 391 | R | A | -0.5642 | |
| 392 | L | A | 0.0000 | |
| 393 | G | A | 0.0000 | |
| 394 | F | A | 0.0000 | |
| 395 | S | A | 0.0000 | |
| 396 | S | A | 0.3742 | |
| 397 | S | A | 0.0000 | |
| 398 | L | A | 0.0000 | |
| 399 | L | A | -0.0785 | |
| 400 | F | A | 0.7153 | |
| 401 | R | A | -0.2577 | |
| 402 | Q | A | -0.9608 | |
| 403 | T | A | 0.0000 | |
| 404 | T | A | -0.0890 | |
| 405 | C | A | 0.0000 | |
| 406 | S | A | -0.3783 | |
| 407 | N | A | -0.5131 | |
| 408 | F | A | 0.0000 | |
| 409 | N | A | -0.2723 | |
| 410 | F | A | 0.1053 | |
| 411 | T | A | -0.0364 | |
| 412 | S | A | -0.3607 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine