| Chain sequence(s) |
B: TPQEKHNRYVEEQKWWMERFLKDQGEETYEIYLPAYRKRVEESKKDPKVPPTIPWVDP
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:46)
[INFO] Main: Simulation completed successfully. (00:02:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | T | B | -1.4328 | |
| 2 | P | B | -1.9155 | |
| 3 | Q | B | -2.8288 | |
| 4 | E | B | -3.2035 | |
| 5 | K | B | -3.4493 | |
| 6 | H | B | -2.8414 | |
| 7 | N | B | -3.6652 | |
| 8 | R | B | -3.8756 | |
| 9 | Y | B | -2.0854 | |
| 10 | V | B | 0.0000 | |
| 11 | E | B | -3.8441 | |
| 12 | E | B | -2.7853 | |
| 13 | Q | B | -1.8777 | |
| 14 | K | B | -2.2792 | |
| 15 | W | B | -0.5070 | |
| 16 | W | B | 0.3140 | |
| 17 | M | B | -0.3729 | |
| 18 | E | B | -0.8695 | |
| 19 | R | B | -1.1451 | |
| 20 | F | B | -0.0706 | |
| 21 | L | B | 0.0000 | |
| 22 | K | B | -3.2832 | |
| 23 | D | B | -2.8968 | |
| 24 | Q | B | -2.6243 | |
| 25 | G | B | -2.9166 | |
| 26 | E | B | -3.8836 | |
| 27 | E | B | -3.4104 | |
| 28 | T | B | -2.2439 | |
| 29 | Y | B | -2.6165 | |
| 30 | E | B | -2.6718 | |
| 31 | I | B | -1.0871 | |
| 32 | Y | B | -0.5290 | |
| 33 | L | B | -1.4231 | |
| 34 | P | B | -1.2501 | |
| 35 | A | B | -0.9818 | |
| 36 | Y | B | 0.0000 | |
| 37 | R | B | -3.5872 | |
| 38 | K | B | -3.6255 | |
| 39 | R | B | -2.9893 | |
| 40 | V | B | 0.0000 | |
| 41 | E | B | -4.2325 | |
| 42 | E | B | -3.4834 | |
| 43 | S | B | 0.0000 | |
| 44 | K | B | -3.3952 | |
| 45 | K | B | -3.2086 | |
| 46 | D | B | -2.6323 | |
| 47 | P | B | -2.2173 | |
| 48 | K | B | -2.2437 | |
| 49 | V | B | -1.5721 | |
| 50 | P | B | -0.8257 | |
| 51 | P | B | -1.5003 | |
| 52 | T | B | 0.0743 | |
| 53 | I | B | 0.5791 | |
| 54 | P | B | 0.2999 | |
| 55 | W | B | 1.0939 | |
| 56 | V | B | 0.1327 | |
| 57 | D | B | -1.4022 | |
| 58 | P | B | -1.2112 |